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The Drug Ontology
Last uploaded:
December 20, 2024
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| Preferred Name | fondaparinux | |
| Synonyms |
Natural heparin pentasaccharide fondaparin methyl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranosyl-(1->4)-beta-D-glucopyranuronosyl-(1->4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranosyl-(1->4)-2-O-sulfo-alpha-L-idopyranuronosyl-(1->4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside |
|
| Definitions |
A synthetic pentasaccharide which, apart from the O-methyl group at the reducing end of the molecule, consists of monomeric sugar units which are identical to a sequence of five monomeric sugar units that can be isolated after either chemical or enzymatic cleavage of the polymeric glycosaminoglycans heparin and heparan sulfate. |
|
| ID |
http://purl.obolibrary.org/obo/CHEBI_61033 |
|
| alternative label |
Natural heparin pentasaccharide fondaparin methyl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranosyl-(1->4)-beta-D-glucopyranuronosyl-(1->4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranosyl-(1->4)-2-O-sulfo-alpha-L-idopyranuronosyl-(1->4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside
|
|
| charge |
0
|
|
| database_cross_reference |
PPR:PPR103739 PDBeChem:NTO Drug_Central:1236 Reaxys:9381701 PMID:30169652 Wikipedia:Fondaparinux PMID:30656269 CAS:104993-28-4 PMID:31549765 PMID:31782283 PMID:31251320 PMID:29531454 PMID:31030756
|
|
| definition |
A synthetic pentasaccharide which, apart from the O-methyl group at the reducing end of the molecule, consists of monomeric sugar units which are identical to a sequence of five monomeric sugar units that can be isolated after either chemical or enzymatic cleavage of the polymeric glycosaminoglycans heparin and heparan sulfate.
|
|
| formula |
C31H53N3O49S8
|
|
| has characteristic | ||
| has functional parent | ||
| has role | ||
| has_alternative_id |
CHEBI:44566
|
|
| has_exact_synonym |
methyl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranosyl-(1->4)-beta-D-glucopyranuronosyl-(1->4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranosyl-(1->4)-2-O-sulfo-alpha-L-idopyranuronosyl-(1->4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside
|
|
| has_obo_namespace |
chebi_ontology
|
|
| has_related_synonym |
Natural heparin pentasaccharide fondaparin
|
|
| has_RxCUI |
321208
|
|
| id |
CHEBI:61033
|
|
| in_subset | ||
| inchi |
InChI=1S/C31H53N3O49S8/c1-69-27-9(33-85(48,49)50)13(37)17(6(74-27)3-71-88(57,58)59)76-31-22(83-91(66,67)68)16(40)21(24(81-31)26(43)44)79-29-10(34-86(51,52)53)19(82-90(63,64)65)18(7(75-29)4-72-89(60,61)62)77-30-15(39)14(38)20(23(80-30)25(41)42)78-28-8(32-84(45,46)47)12(36)11(35)5(73-28)2-70-87(54,55)56/h5-24,27-40H,2-4H2,1H3,(H,41,42)(H,43,44)(H,45,46,47)(H,48,49,50)(H,51,52,53)(H,54,55,56)(H,57,58,59)(H,60,61,62)(H,63,64,65)(H,66,67,68)/t5-,6-,7-,8-,9-,10-,11-,12-,13-,14-,15-,16+,17-,18-,19-,20+,21+,22-,23+,24-,27+,28-,29-,30-,31-/m1/s1
|
|
| inchikey |
KANJSNBRCNMZMV-ABRZTLGGSA-N
|
|
| is conjugate acid of | ||
| label |
fondaparinux
|
|
| mass |
1508.26300
|
|
| monoisotopicmass |
1506.95133
|
|
| notation |
CHEBI:61033
|
|
| prefLabel |
fondaparinux
|
|
| smiles |
CO[C@H]1O[C@H](COS(O)(=O)=O)[C@@H](O[C@@H]2O[C@H]([C@@H](O[C@H]3O[C@H](COS(O)(=O)=O)[C@@H](O[C@@H]4O[C@@H]([C@@H](O[C@H]5O[C@H](COS(O)(=O)=O)[C@@H](O)[C@H](O)[C@H]5NS(O)(=O)=O)[C@H](O)[C@H]4O)C(O)=O)[C@H](OS(O)(=O)=O)[C@H]3NS(O)(=O)=O)[C@H](O)[C@H]2OS(O)(=O)=O)C(O)=O)[C@H](O)[C@H]1NS(O)(=O)=O
|
|
| subClassOf |
http://purl.obolibrary.org/obo/CHEBI_37909 |
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