Uber Anatomy Ontology

Last uploaded: March 22, 2024
Preferred Name

diencephalon

Synonyms

mature diencephalon

between brain

thalamencephalon

interbrain

DiE

betweenbrain

diencephalon

Definitions

The division of the forebrain that develops from the foremost primary cerebral vesicle.

ID

http://purl.obolibrary.org/obo/UBERON_0001894

contributes to morphology of

http://purl.obolibrary.org/obo/UBERON_0001890

database_cross_reference

EMAPA:16896

neuronames:288

MIAA:0000420

Wikipedia:Diencephalon

MESH:D004027

PBA:128013010

AAO:0010481

SCTID:279328001

BTO:0000342

EFO:0000911

ZFA:0000101

MAT:0000420

BIRNLEX:1503

EHDAA2:0000385

UMLS:C0012144

XAO:0000013

TAO:0000101

CALOHA:TS-0199

NCIT:C12456

VHOG:0000318

BAMS:DI

BAMS:Di

BAMS:DiE

BAMS:IB

BAMS:Zh.

BM:Die

DHBA:10389

DMBA:16308

EHDAA:1969

EHDAA:2645

EHDAA:3472

EV:0100194

FMA:62001

GAID:618

HBA:4391

MA:0000171

MBA:1129

definition

The division of the forebrain that develops from the foremost primary cerebral vesicle.

depiction

http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg

develops_from

http://purl.obolibrary.org/obo/UBERON_0006222

external_definition

Unpaired part of the forebrain comprised of three major parts; the epithalamus, thalamus, and hypothalamus.[AAO]

The more posterior and ventral of two forebrain neuromeres, the other being the telencephalon; major derivatives are the eye cups, the brain pretectal region, the thalamus, hypothalamus, and epithalamus (including the habenula and epiphysis). Kimmel et al, 1995.[TAO]

external_ontology_notes

in ABA, this is part of the brain stem

has developmental contribution from

http://purl.obolibrary.org/obo/UBERON_0003851

has_broad_synonym

DiE

has_exact_synonym

mature diencephalon

between brain

thalamencephalon

interbrain

has_obo_namespace

uberon

has_related_synonym

betweenbrain

diencephalon

has_relational_adjective

diencephalic

homology_notes

Fine structural, computerized three-dimensional (3D) mapping of cell connectivity in the amphioxus nervous system and comparative molecular genetic studies of amphioxus and tunicates have provided recent insights into the phylogenetic origin of the vertebrate nervous system. The results suggest that several of the genetic mechanisms for establishing and patterning the vertebrate nervous system already operated in the ancestral chordate and that the nerve cord of the proximate invertebrate ancestor of the vertebrates included a diencephalon, midbrain, hindbrain, and spinal cord.[well established][VHOG]

id

UBERON:0001894

immediate transformation of

http://purl.obolibrary.org/obo/UBERON_0006222

in_subset

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

diencephalon

notation

UBERON:0001894

part_of

http://purl.obolibrary.org/obo/UBERON_0001890

prefLabel

diencephalon

present_in_taxon

http://purl.obolibrary.org/obo/NCBITaxon_7762

treeView

http://purl.obolibrary.org/obo/UBERON_0006222

http://purl.obolibrary.org/obo/UBERON_0001890

mutually_spatially_disjoint_with

http://purl.obolibrary.org/obo/UBERON_0002028

http://purl.obolibrary.org/obo/UBERON_0001891

subClassOf

http://purl.obolibrary.org/obo/UBERON_0002616

http://purl.obolibrary.org/obo/UBERON_0010314

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0001894 EFO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 DOID SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 PATO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 OBA SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 MONDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 NPOKB SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 CLO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 PCL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 NIFDYS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 EPIO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 BERO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 HHEAR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 UPHENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 KTAO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 MAXO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 CCF SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 ENVO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 FNS-H SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001894 NMDCO SAME_URI
http://purl.obolibrary.org/obo/ZFA_0000101 ZP LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 DOID LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 PATO LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 OBA LOOM
http://www.case.edu/EpilepsyOntology.owl#Diencephalon EPSO LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 CL LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 GO-PLUS LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_1503 NIFSTD LOOM
http://api.brain-map.org:80/api/v2/data/Structure/128013010 NIFSTD LOOM
http://purl.obolibrary.org/obo/MAT_0000420 MAT LOOM
http://purl.bioontology.org/ontology/RCD/Xa13F RCD LOOM
http://purl.org/obo/owlapi/fma#FMA_62001 BIOMODELS LOOM
http://www.semanticweb.org/rjyy/ontologies/2015/5/ESSO#Diencephalon ESSO LOOM
http://www.semanticweb.org/rjyy/ontologies/2015/5/ESSO#Diencephalon MEPO LOOM
http://purl.obolibrary.org/obo/BTO_0000342 BTO LOOM
http://localhost/plosthes.2017-1#10389 PLOSTHES LOOM
http://purl.obolibrary.org/obo/ZFA_0000101 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000101 UPHENO LOOM
http://purl.obolibrary.org/obo/ZFA_0000101 ZP LOOM
http://purl.obolibrary.org/obo/MFO_0002280 MFO LOOM
http://purl.obolibrary.org/obo/EHDA_9931 EHDA LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 NPOKB LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 CLO LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 PCL LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 NIFDYS LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 EPIO LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 KTAO LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 MAXO LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 CCF LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 ENVO LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 FNS-H LOOM
http://purl.obolibrary.org/obo/UBERON_0001894 NMDCO LOOM
http://purl.obolibrary.org/obo/EHDAA_1969 EHDAA LOOM
http://www.semanticweb.org/ontologies/2009/9/Ontology1255357986125.owl#Diencephalon BRCT LOOM
http://purl.bioontology.org/ontology/MESH/D004027 MESH LOOM
http://purl.obolibrary.org/obo/EHDA_6544 EHDA LOOM
http://purl.obolibrary.org/obo/EHDAA2_0000385 EHDAA2 LOOM
http://purl.obolibrary.org/obo/EHDAA_2645 EHDAA LOOM
http://purl.obolibrary.org/obo/EHDA_4466 EHDA LOOM
http://purl.jp/bio/4/id/200906007121763568 IOBC LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#A08.186.211.730.317 RH-MESH LOOM
http://www.case.edu/EpSO.owl#Diencephalon MEPO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0012144 OCHV LOOM
http://purl.obolibrary.org/obo/XAO_0000013 XPO LOOM
http://purl.obolibrary.org/obo/XAO_0000013 UPHENO LOOM
http://purl.obolibrary.org/obo/XAO_0000013 XAO LOOM
http://neuromorpho.org/ontologies/vertebrateH.owl#NMOBr_184 NMOBR LOOM
http://purl.obolibrary.org/obo/EHDA_3473 EHDA LOOM
http://purl.obolibrary.org/obo/EHDA_5429 EHDA LOOM
http://purl.obolibrary.org/obo/EMAPA_16896 EMAPA LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Diencephalon SYN LOOM
http://scai.fraunhofer.de/AlzheimerOntology#diencephalon ADO LOOM
http://scai.fraunhofer.de/AlzheimerOntology#diencephalon NIO LOOM
http://www.co-ode.org/ontologies/galen#Diencephalon GALEN LOOM
http://purl.obolibrary.org/obo/NCIT_C12456 BERO LOOM
http://purl.obolibrary.org/obo/VHOG_0000318 VHOG LOOM
http://purl.obolibrary.org/obo/EHDA_7510 EHDA LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_1503 BIRNLEX LOOM
http://id.nlm.nih.gov/mesh/D004027 MDM LOOM
http://purl.bioontology.org/ontology/CSP/0478-1940 CRISP LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D004027 RH-MESH LOOM
http://purl.obolibrary.org/obo/EHDA_2646 EHDA LOOM
http://purl.obolibrary.org/obo/OMIT_0005297 OMIT LOOM
http://purl.obolibrary.org/obo/TAO_0000101 TAO LOOM
http://purl.obolibrary.org/obo/EHDA_1970 EHDA LOOM
http://purl.obolibrary.org/obo/EHDA_8749 EHDA LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12456 NCIT LOOM
http://purl.bioontology.org/ontology/SNMI/T-A0102 SNMI LOOM
http://purl.obolibrary.org/obo/FMA_62001 NIO LOOM
http://purl.obolibrary.org/obo/EHDAA_3472 EHDAA LOOM
http://purl.obolibrary.org/obo/MA_0000171 MA LOOM
http://www.semanticweb.org/ontologies/2009/3/ontoDPN.owl#Diencephale_F EPO LOOM
http://purl.org/sig/ont/fma/fma62001 FMA LOOM
http://www.projecthalo.com/aura#Diencephalon AURA LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Diencephalon APANEUROCLUSTER LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Diencephalon APAONTO LOOM
http://radlex.org/RID/RID6566 RADLEX LOOM