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Sequence Types and Features Ontology
Last uploaded:
September 11, 2025
| Id | http://purl.obolibrary.org/obo/SO_0000235
http://purl.obolibrary.org/obo/SO_0000235
|
|---|---|
| Preferred Name | TF_binding_site |
| Definitions |
Definition updated along with definitions in Mejia-Almonte et.al PMID:32665585. Added relationship part_of SO:0000727 CRM in place of previous CRM relationship has_part TF_binding_site August 2020 in response to requests from GREEKC initiative. Moved from transcription_regulatory_region (SO:0001679) to transcriptional_cis_regulatory_region (SO:0001055) by Dave Sant on Feb 11, 2021 when transcription_regulatory_region was merged into transcriptional_cis_regulatory_region to be consistent with GO and reduce redundancy as part of the GREEKC consortium. See GitHub Issue #527.
A DNA site where a transcription factor binds.
|
| Synonyms |
transcription factor binding site
TF binding site
|
| Type | http://www.w3.org/2002/07/owl#Class |
All Properties
| definition | A DNA site where a transcription factor binds. |
|---|---|
| prefLabel | TF_binding_site
|
| label | TF_binding_site
|
| comment | Definition updated along with definitions in Mejia-Almonte et.al PMID:32665585. Added relationship part_of SO:0000727 CRM in place of previous CRM relationship has_part TF_binding_site August 2020 in response to requests from GREEKC initiative. Moved from transcription_regulatory_region (SO:0001679) to transcriptional_cis_regulatory_region (SO:0001055) by Dave Sant on Feb 11, 2021 when transcription_regulatory_region was merged into transcriptional_cis_regulatory_region to be consistent with GO and reduce redundancy as part of the GREEKC consortium. See GitHub Issue #527.
|
| has_exact_synonym |
transcription factor binding site
TF binding site
|
| has_obo_namespace | sequence
|
| type | |
| id | SO:0000235
|
| in_subset | |
| part_of | |
| notation | SO:0000235
|
| treeView | |
| subClassOf |
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