Sequence Types and Features Ontology

Last uploaded: November 18, 2024
Preferred Name

DMv4_motif
Synonyms

YGGTCACATR

promoter motif 1

directional motif v4

motif 1 element

DMv4

DMv4 motif

Definitions

A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements with respect to the TSS (+1). Consensus sequence is YGGTCACACTR. Marked spatial preference within core promoter; tend to occur near the TSS, although not as tightly as INR (SO:0000014).

ID

http://purl.obolibrary.org/obo/SO_0001157

definition

A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements with respect to the TSS (+1). Consensus sequence is YGGTCACACTR. Marked spatial preference within core promoter; tend to occur near the TSS, although not as tightly as INR (SO:0000014).

has_exact_synonym

promoter motif 1

directional motif v4

motif 1 element

DMv4

DMv4 motif

has_narrow_synonym

YGGTCACATR

has_obo_namespace

sequence

id

SO:0001157

label

DMv4_motif

notation

SO:0001157

prefLabel

DMv4_motif

subClassOf

http://purl.obolibrary.org/obo/SO_0001659

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