PMO Precision Medicine Ontology

Last uploaded: December 16, 2020
Preferred Name

Intermediate Filament
Synonyms
Definitions

"A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins." [http://www.cytochemistry.net/Cell-biology/intermediate_filaments.htm, ISBN:0198506732]

ID

http://www.phoc.org.cn/pmo/class/PMO_00054719

Database_Cross_Reference

GO:0005882

Definition

"A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins." [http://www.cytochemistry.net/Cell-biology/intermediate_filaments.htm, ISBN:0198506732]

Gene Annotation

KRT40(UniProtKB:Q6A162)

KRTAP19-7(UniProtKB:Q3SYF9)

KRT28(UniProtKB:Q7Z3Y7)

SYNC(UniProtKB:Q9H7C4)

KRTAP13-1(UniProtKB:Q8IUC0)

KRT25(UniProtKB:Q7Z3Z0)

KRT31(UniProtKB:Q15323)

SCYGR3(UniProtKB:A0A286YF60)

KRT27(UniProtKB:Q7Z3Y8)

MACF1(UniProtKB:Q9UPN3)

FLG(UniProtKB:P20930)

KRT5(UniProtKB:P13647)

H3BQV1(UniProtKB:H3BQV1)

PKP1(UniProtKB:Q13835)

KRTAP17-1(UniProtKB:Q9BYP8)

KRT12(UniProtKB:Q99456)

KRTAP11-1(UniProtKB:Q8IUC1)

KRT24(UniProtKB:Q2M2I5)

KRT34(UniProtKB:O76011)

KRTAP8-1(UniProtKB:Q8IUC2)

KRTAP21-1(UniProtKB:Q3LI58)

SCYGR10(UniProtKB:A0A286YEX9)

KRTAP22-1(UniProtKB:Q3MIV0)

KRTAP13-3(UniProtKB:Q3SY46)

SLC1A4(UniProtKB:P43007)

KRT19(UniProtKB:P08727)

KRTAP19-3(UniProtKB:Q7Z4W3)

IFFO2(UniProtKB:Q5TF58)

KRTAP20-4(UniProtKB:Q3LI62)

KRTAP19-2(UniProtKB:Q3LHN2)

NCKIPSD(UniProtKB:Q9NZQ3)

LOC100653049(UniProtKB:A0A140TA62)

KRTAP20-2(UniProtKB:Q3LI61)

KRTAP21-2(UniProtKB:Q3LI59)

KRTAP19-4(UniProtKB:Q3LI73)

KRT33A(UniProtKB:O76009)

KRTAP15-1(UniProtKB:Q3LI76)

DSP(UniProtKB:P15924)

ADORA2A(UniProtKB:P29274)

TLK2(UniProtKB:Q86UE8)

NME2(UniProtKB:P22392)

MYO5A(UniProtKB:Q9Y4I1)

SYNM(UniProtKB:O15061)

KRT3(UniProtKB:P12035)

EVPLL(UniProtKB:A8MZ36)

KRT8(UniProtKB:P05787)

KRT20(UniProtKB:P35900)

JUP(UniProtKB:P14923)

KRT6C(UniProtKB:P48668)

PRPH(UniProtKB:P41219)

SCYGR5(UniProtKB:A0A286YF46)

BFSP2(UniProtKB:Q13515)

MICAL1(UniProtKB:Q8TDZ2)

KRTAP26-1(UniProtKB:Q6PEX3)

SCYGR4(UniProtKB:A0A286YEV6)

KRT222(UniProtKB:Q8N1A0)

KRTAP6-1(UniProtKB:Q3LI64)

KRT39(UniProtKB:Q6A163)

IFFO1(UniProtKB:Q0D2I5)

KRTAP19-8(UniProtKB:Q3LI54)

SCYGR7(UniProtKB:A0A286YF01)

KRT35(UniProtKB:Q92764)

VIM(UniProtKB:P08670)

PKP2(UniProtKB:Q99959)

DES(UniProtKB:P17661)

EPPK1(UniProtKB:P58107)

KRT2(UniProtKB:P35908)

SCYGR6(UniProtKB:A0A286YF77)

KRT38(UniProtKB:O76015)

NES(UniProtKB:P48681)

KRTAP19-1(UniProtKB:Q8IUB9)

MNS1(UniProtKB:Q8NEH6)

KRT15(UniProtKB:P19012)

KRT9(UniProtKB:P35527)

DST(UniProtKB:Q03001)

GJA1(UniProtKB:P17302)

KRT18(UniProtKB:P05783)

KRT36(UniProtKB:O76013)

PPL(UniProtKB:O60437)

KRTAP19-5(UniProtKB:Q3LI72)

SCYGR8(UniProtKB:A0A286YFG1)

LMNTD1(UniProtKB:Q8N9Z9)

KRTAP20-3(UniProtKB:Q3LI60)

GFAP(UniProtKB:P14136)

KRTAP13-4(UniProtKB:Q3LI77)

KRTAP23-1(UniProtKB:A1A580)

KRT23(UniProtKB:Q9C075)

KRT26(UniProtKB:Q7Z3Y9)

KRTAP20-1(UniProtKB:Q3LI63)

CLIP1(UniProtKB:P30622)

PNN(UniProtKB:Q9H307)

SCYGR2(UniProtKB:A0A286YFB4)

KRT32(UniProtKB:Q14532)

KRT33B(UniProtKB:Q14525)

KRTAP12-4(UniProtKB:P60329)

KRTAP22-2(UniProtKB:Q3LI68)

KRT4(UniProtKB:P19013)

PLEC(UniProtKB:Q15149)

NME1(UniProtKB:P15531)

KRTAP6-2(UniProtKB:Q3LI66)

KRT76(UniProtKB:Q01546)

KRT37(UniProtKB:O76014)

KRTAP7-1(UniProtKB:Q8IUC3)

KRT14(UniProtKB:P02533)

KRT17(UniProtKB:Q04695)

KRT16(UniProtKB:P08779)

KRT10(UniProtKB:P13645)

KRTAP6-3(UniProtKB:Q3LI67)

EVPL(UniProtKB:Q92817)

KRTAP21-3(UniProtKB:Q3LHN1)

KRTAP19-6(UniProtKB:Q3LI70)

BFSP1(UniProtKB:Q12934)

KRTAP25-1(UniProtKB:Q3LHN0)

KRTAP13-2(UniProtKB:Q52LG2)

KRT7(UniProtKB:P08729)

SCYGR1(UniProtKB:A0A286YEY9)

KRT75(UniProtKB:O95678)

KRTAP27-1(UniProtKB:Q3LI81)

label

Intermediate Filament

MCID

MC04797576

PMOID

PMO:00054719

prefixIRI

pmo:PMO_00054719

prefLabel

Intermediate Filament

Synonym

"intermediate filament associated protein" RELATED []

"type II intermediate filament associated protein" RELATED []

"type I intermediate filament associated protein" RELATED []

Tree Number

T10.3.14.13.16.12.3

T10.3.7.100.34.16.12.3

T10.3.18.4.2.4.3

subClassOf

http://www.phoc.org.cn/pmo/class/PMO_00054701

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Mapping To Ontology Source
http://purl.obolibrary.org/obo/GO_0005882 UBERON LOOM
http://purl.obolibrary.org/obo/GO_0005882 CL LOOM
http://purl.obolibrary.org/obo/GO_0005882 OBA LOOM
http://uri.neuinfo.org/nif/nifstd/sao952483289 NIFSTD LOOM
http://purl.obolibrary.org/obo/GO_0005882 NIGO LOOM
http://purl.obolibrary.org/obo/GO_0005882 GO-EXT LOOM
http://purl.obolibrary.org/obo/GO_0005882 FOVT LOOM
http://purl.obolibrary.org/obo/GO_0005882 CCO LOOM
http://purl.obolibrary.org/obo/GO_0005882 REXO LOOM
http://purl.obolibrary.org/obo/GO_0005882 GEXO LOOM
http://purl.obolibrary.org/obo/GO_0005882 PHAGE LOOM
http://purl.obolibrary.org/obo/GO_0005882 GO-PLUS LOOM
http://purl.obolibrary.org/obo/GO_0005882 BERO LOOM
http://purl.obolibrary.org/obo/GO_0005882 HHEAR LOOM
http://purl.obolibrary.org/obo/GO_0005882 UPHENO LOOM
http://purl.obolibrary.org/obo/GO_0005882 NIFSTD LOOM
http://purl.obolibrary.org/obo/GO_0005882 REGN_GO LOOM
http://purl.obolibrary.org/obo/GO_0005882 RETO LOOM
http://purl.obolibrary.org/obo/GO_0005882 MAXO LOOM
http://purl.obolibrary.org/obo/GO_0005882 GO LOOM
http://purl.obolibrary.org/obo/GO_0005882 ZP LOOM
http://purl.org/obo/owl/GO#GO_0005882 BIOMODELS LOOM
http://purl.obolibrary.org/obo/NCIT_C13248 BERO LOOM
http://purl.jp/bio/4/id/200906018953921270 IOBC LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_879 BIRNLEX LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_879 NIFSTD LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13248 NCIT LOOM
http://purl.bioontology.org/ontology/CSP/0595-3566 CRISP LOOM
http://www.projecthalo.com/aura#Intermediate-Filament AURA LOOM
http://purl.org/sig/ont/fma/fma63851 FMA LOOM
http://ccdb.ucsd.edu/SAO/1.2#sao952483289 SAO LOOM
http://purl.org/obo/owlapi/fma#FMA_63851 BIOMODELS LOOM
http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Subcellular.owl#birnlex_879 NIFSUBCELL LOOM
http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Subcellular.owl#sao952483289 NIFSUBCELL LOOM