Protein-ligand interaction ontology

Last uploaded: November 3, 2014
Preferred Name

Protein_domain

Synonyms
ID

http://www.semanticweb.org/ontologies/2010/3/Ontology1271664172453.owl#Protein_domain

isDefinedBy

A structurally or functionally defined protein region. A protein domain is a part of protein sequence and structure that can evolve, function, and exist independently of the rest of the protein chain. Each domain forms a compact three-dimensional structure and often can be independently stable and folded. Many proteins consist of several structural domains. One domain may appear in a variety of different proteins. Molecular evolution uses domains as building blocks and these may be recombined in different arrangements to create proteins with different functions. Domains vary in length from between about 25 amino acids up to 500 amino acids in length.

prefixIRI

Ontology1271664172453:Protein_domain

prefLabel

Protein_domain

Reference

http://www.nlm.nih.gov/research/umls/ http://en.wikipedia.org/wiki/Protein_domain Xie, L., et al., Knowledge Discovery of Protein-Ligand Interaction Network, in Conference on Semantics in Healthcare and Life Sciences (CSHALS). 2010: Cambridge/Boston, MA.

Synonym

protein domain protein domains protein motif protein region signatures signature domain domains protein feature motif motifs ligand-binding domain ligand-binding domains

protein domain protein domains protein motif protein region signatures signature domain domains protein feature motif ligand-binding domain ligand-binding domains LBD

subClassOf

http://www.semanticweb.org/ontologies/2010/3/Ontology1271664172453.owl#Protein_fragment

Delete Subject Author Type Created
No notes to display