Phylogenetics Ontology

Last uploaded: July 5, 2016
Preferred Name

obsolete transfer RNA
Synonyms

transfer RNA

Definitions

OBSOLETE. (Was not defined before being made obsolete). This term was made obsolete because it represents a gene product.

ID

http://purl.obolibrary.org/obo/GO_0005563

Obsolete

true

comment

This term was made obsolete because it represents a gene product.

definition

OBSOLETE. (Was not defined before being made obsolete).

deprecated

true

has_exact_synonym

transfer RNA

has_obo_namespace

molecular_function

id

GO:0005563

label

obsolete transfer RNA

notation

GO:0005563

prefLabel

obsolete transfer RNA

term replaced by

GO:0030533

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Ontology Mappings
AdaLab ontology 185
AdaLab-meta ontology 3
Adverse Childhood Experiences Ontology 2
Adverse Event Reporting Ontology 2
AGRonomy Ontology 53
Allotrope Merged Ontology Suite 3
Alzheimer Disease Map Ontology 48
Alzheimer's Disease Ontology 43
An Ontology for Indian Biodiversity Knowledge Management 4
An Ontology for integration and interoperability of multi-aspect data of Protein food production chains 2
An ontology of core ecological entities 347
Anatomic Ontology for Human Lung Maturation 3
Anatomic Ontology for Mouse Lung Maturation 3
Anatomical Entity Ontology 1
Anatomical Therapeutic Chemical Classification 7
Animal Health Ontology for Livestock 2
Animal Natural History and Life History Ontology 7
Animal Trait Ontology for Livestock 41
Anthology of Biosurveillance Diseases 8
Antibiotic Resistance Ontology 1
APA Neuro Cluster 12
APA Treatment Cluster 3
Apollo Structured Vocabulary 23
Artificial Intelligence Ontology 4
Artificial Intelligence Rheumatology Consultant System Ontology 7
Ascomycete Phenotype Ontology 36
Assessment of Indian Economy During Covid-19 551
Atherosclerotic Cerebrovascular Disease Ontology 10
Atlas Ontology Model 1
Autism DSM-ADI-R ontology 4
Autism Spectrum Disorder Phenotype Ontology 2
Bacterial interlocked Process ONtology 144
Behaviour Change Technique Taxonomy 1
Beta Cell Genomics Ontology 252
Bilingual Ontology of Alzheimer's Disease and Related Diseases 78
BioAssay Ontology 146
Biodiversity Ontology 2
Biodiversity Thesaurus 2
Bioentities 2
Biofilm Ontology 7
Bioinformatics Web Service Ontology 1
Biolink Model 17
Biological and Environmental Research Ontology 51,703
Biological Collections Ontology 9
Biological Imaging Methods Ontology 6
Biological interlocked Process Ontology for metabolism 24
Biological Observation Matrix Ontology 12
Biological Pathway Taxonomy 55
BioMedBridges Diabetes Ontology 1
Biomedical Image Ontology 3
Biomedical Informatics Research Network Project Lexicon 13
Biomedical Resource Ontology 5
BioMedical Study Lifecycle Management 1
Biomedical Topics 3
BioModels Ontology 26,281
BioPAX Ontology of Biological Pathways 1
BioTop Ontology 12
Bleeding History Phenotype Ontology 1
Bone and Cartilage Tissue Engineering Ontology 1
Bone Dysplasia Ontology 2
Brain Region & Cell Type terminology 8
Brain-Computer Interaction (BCI) Ontology 1
BrainTeaser Ontology (BTO) 1
Breast Cancer Grading Ontology 1
BRENDA Tissue and Enzyme Source Ontology 18
Bricks ontology 68
Brinell Test Ontology-EMMO 6
Brucellosis Ontology 45
C. elegans Gross Anatomy Vocabulary 3
C. elegans Phenotype Vocabulary 1
Cancer Care: Treatment Outcome Ontology 2
Cancer Research and Management ACGT Master Ontology 10
CARRE Risk Factor ontology 2
Cell Behavior Ontology 20
Cell Culture Ontology 756
Cell Cycle Ontology 15,103
Cell Line Ontology 747
Cell Ontology 7,364
Cellular microscopy phenotype ontology 381
Cephalopod Ontology 21
Cereal Plant Development Ontology 3
Cereal Plant Gross Anatomy Ontology 18
Cerebrotendinous Xanthomatosis Ontology 1
Cerrado concepts and plant community dynamics 3
CHEBI Integrated Role Ontology 1,250
Chemical Information Ontology 1
Chemical Methods Ontology 1
CHEMROF 1
Children's Health Exposure Analysis Resource 36
Chromatin Regulator Ontology 758
Cigarette Smoke Exposure Ontology 40
Ciona intestinalis Anatomy and Development Ontology 1
Ciona savignyi Anatomy and Development Ontology 1
Clinical MetaData Ontology 1
Clinical Signs and Symptoms Ontology 3
Clinical Trials Ontology - Neurodegenerative Diseases 2
Clytia hemisphaerica Development and Anatomy Ontology 3
Coastal and Marine Ecological Classification Standard Catalog 1
Coding Symbols for a Thesaurus of Adverse Reaction Terms 9
CODO: an Ontology for collection and analysis of COviD-19 data 2
Cognitive Atlas Ontology 21
Collembola Anatomy Ontology 26
Combined Ontology for Inflammatory Diseases 4
Combined Phenotype Ontology 11,558
Common Anatomy Reference Ontology 236
Comparative Data Analysis Ontology 1
Computational Neuroscience Ontology 1
computer network 4
Computer Retrieval of Information on Scientific Projects Thesaurus 197
Computer-Based Patient Record Ontology 1
Consumer Wearable Device 1
Content Archive Resource Exchange Lexicon 1
Core Ontology for Biology and Biomedicine 4
Coronavirus Infectious Disease Ontology 562
COVID-19 Ontology 708
COVID-19OntologyInPatternMedicine 1
CrossRef Funder Registry 1
Ctenophore Ontology 41
Culture, Race, Ethnicity and Nationality Ontology 7
Data Science Education Ontology 1
Dataset processing 2
Dementia-Related Emotional And Mood Disturbance Non-Pharmacological Treatment Ontology 1
Dengue Fever Ontology 129
Dermatology Lexicon 5
Devices, Experimental scaffolds and Biomaterials Ontology 14
DICOM Controlled Terminology 6
Dictyostelium Discoideum Phenotype Ontology 1
Dietary lifestyle ontology 1
Disease core ontology applied to Rare Diseases 1
Drosophila Development Ontology 4
Drosophila Gross Anatomy Ontology 21
Drosophila Phenotype Ontology 243
Drug Interaction and Evidence Ontology 30
Drug Interaction Knowledge Base Ontology 1
Drug Target Ontology 9
DSMZ Digital Diversity Ontology 7
Eagle-I Research Resource Ontology 6
Early Pregnancy Ontology 2
ecosim ontology 6
EDAM - The data analysis and management ontology 18
Educational Cluster 2
Electrocardiography Ontology 5
eLTER Controlled Lists 2
Emergency care ontology 1
EMIF-AD ontology 2
Emotion Ontology 226
eNanoMapper 9
Environment Ontology 46
Environmental conditions, treatments and exposures ontology 334
Enzyme Mechanism Ontology 3
Enzyme Reaction Ontology for annotating Partial Information of chemical transformation 1
Epigenetic Entity 12
Epigenetic Process 15
Epigenome Ontology 146
Epilepsy and Seizure Ontology 5
Epilepsy Ontology 1
Epilepsy Semiology 3
Epilepsy Syndrome Seizure Ontology 8
EpilepsyOntology 27
Exercise Medicine Ontology 3
Experimental Conditions Ontology 8
Experimental Factor Ontology 756
Exposure Ontology 1
FamPlex 5
Fanconi Anemia Ontology 6
Fish Ontology 3
Fission Yeast Phenotype Ontology 4,644
Fitbit Vocabularies 1
Flora Phenotype Ontology 6
Fly Taxonomy 3
FlyBase Controlled Vocabulary 3
FlyGlycoDB 1
FNS-Harmony 6
Food Interactions with Drugs Evidence Ontology 30
Foundational Model of Anatomy 172
Functional Therapeutic Chemical Classification System 35,160
Fungal Gross Anatomy Ontology 3
FuTRES Ontology of Vertebrate Traits 4,164
G Protein-Coupled Receptor BioAssays Ontology 22
Galen Ontology 80
Gazetteer 3
GBOL 4
Gender, Sex, and Sexual Orientation Ontology 180
Gene Expression Ontology 14,843
Gene Ontology 51,514
Gene Ontology Extension 36,024
Gene Regulation Ontology 73
General Formal Ontology for Biology 5
Genome Component Ontology 1
Genomic Epidemiology Application Ontology 19
Genomic Feature and Variation Ontology 4
Genomics Cohorts Knowledge Ontology 1
Genotype Ontology 6
Global Code Book Ontology 449
GlycoConjugate Ontology 1
GlycoRDF 1
GO FAIR M4M 1
go-plus 51,517
GOLD Ecosystem Classification 3
GoMapMan 13
Group 4-Data Science in Practice 1
Growth Medium Ontology 1
Halocynthia aurantium Anatomy and Development Ontology 1
Halocynthia roretzi Anatomy and Development Ontology 1
Head and Neck Cancer - Clinical and Gene Ontology 2
Health and Social Person-centric Ontology 22
Health Level Seven Reference Implementation Model, Version 3 12
Health Surveillance Ontology 1
Health_ontology 13
Healthcare Common Procedure Coding System 7
Healthcare Monitoring and Emergency Response Ontology 5
Hearing Impairment Ontology 1
Heart Failure Ontology 1
HGNC New Releases Ontology 2
HHEAR Properties 14
Hierarchical Event Descriptors 3
HIVHPVSchistosomiasis 1
HIVOntologymain.owl 12
Holistic Ontology of Rare Diseases 3
Homeostasis imbalance process ontology 1,129
Host Pathogen Interactions Ontology 11
HuBMAP Research Attributes Value Set 2
Human Ancestry Ontology 3
Human Developmental Anatomy Ontology, abstract version 1 2
Human Developmental Anatomy Ontology, abstract version 2 2
Human Developmental Anatomy Ontology, timed version 6
Human Disease Ontology 4
Human Health Exposure Analysis Resource 7,468
Human Interaction Network Ontology 270
Human Phenotype Ontology 4
Human Physiology Simulation Ontology 30
Human Reference Atlas 3
Human Reference Atlas Common Coordinate Framework Ontology 3
Human-Aware Science Ontology 14
Hypersensitivity pneumonitis ontology 2
Hypertension Ontology 35
Image and Data Quality Assessment Ontology 1
Imaging Biomarker Ontology 2
Immunogenetics Ontology 3
Indian Biodiversity Ontology 2
IndianBiodiversity 2
Infectious Disease Ontology 22
Infectious Diseases and Antimicrobial Resistance 3
Influenza Ontology 10
Informed Consent Ontology 2
Integrated Ontology for Symptom Phenotype Terminologies 2
Integrative and Conjugative Element Ontology 13
Intelligence Task Ontology 11
Interaction Network Ontology 17
Interaction Ontology 38
Interlinking Ontology for Biological Concepts 583
International Classification for Nursing Practice 17
International Classification of Diseases Ontology 1
International Classification of Diseases, Version 10 7
International Classification of Diseases, Version 10 - Clinical Modification 7
International Classification of Diseases, Version 10 - Procedure Coding System 7
International Classification of Diseases, Version 9 - Clinical Modification 7
International Classification of Primary Care - 2 PLUS 9
Invasion Biology Ontology 6
Just Enough Results Model Ontology 6
KB_Bio_101 294
Kidney Tissue Atlas Ontology 1,227
Kinetic Simulation Algorithm Ontology 1
LDbase 2
Lepidoptera Anatomy Ontology 3
Life Ontology 60
Lifestyle Factor Ontology 4
LipidOntology 9
Liver Case Ontology (LiCO) 1
Living Environment Ontology 2
Loggerhead Nesting Ontology 1
Logical Observation Identifier Names and Codes 88
M4M.20 FAIRWare Subjects 2
M4M.21 FAIRWare Subjects 1
Macroalgae Traits Thesaurus 1
Magnetic Resonance Dataset Acquisition Ontology 1
Malaria Ontology 117
Mammalian Feeding Muscle Ontology 6
Mammalian Phenotype Ontology 6
Mapping of Drug Names and MeSH 2022 190
Mapping of Epilepsy Ontologies 12
Mass Spectrometry Ontology 1
Master Drug Data Base Clinical Drugs 7
MaterialsMine Ontology 12
Medaka Fish Anatomy and Development Ontology 6
Medical Action Ontology 743
Medical Dictionary for Regulatory Activities Terminology (MedDRA) 35
Medical image simulation 1
Medical Imaging and Diagnostic Ontology 5
Medical Subject Headings 258
MedlinePlus Health Topics 11
Menelas Project Top-Level Ontology 2
Mental Functioning Ontology 226
Mental State Assessment 1
metaBUS controlled vocabulary for organizational and applied psychology research 5
Metagenome and Microbes Environmental Ontology 1
MFO Mental Disease Ontology 226
MHC Restriction Ontology 7
MIAPA Ontology 2
Microarray and Gene Expression Data Ontology 4
Microbial Conditions Ontology 4
Microbial Culture Collection Vocabulary 1
Microbial Phenotype Ontology 15
Microbial Typing Ontology 1
Minimal Anatomical Terminology 8
Minimal Information about any Sequence (MIxS) Controlled Vocabularies 2
Minimal Information about any Sequence Ontology 3
Minimal Standard Terminology of Digestive Endoscopy 9
Minimum PDDI Information Ontology 1
Mobile Genetic Element Ontology 23
Model Card Report Ontology 2
Molecular Interaction Map 1
Molecular Interactions 10
Molecular Process Ontology 5
Molgula occidentalis Anatomy and Development Ontology 1
Molgula occulta Anatomy and Development Ontology 1
Molgula oculata Anatomy and Development Ontology 1
Mondo Disease Ontology 340
Monochrom 60
Mosquito Gross Anatomy Ontology 5
Mosquito Insecticide Resistance 5
Mosquito Vector Association Ontology with Biocontrol Agents 2
Mouse Adult Gross Anatomy Ontology 1
Mouse gross anatomy and development, timed 4
Mouse Pathology Ontology 11
Multiple sclerosis ontology 11
Myocardial Infarction Ontology 7
MyOntoServiceFull_FallDetection 1
Name Reaction Ontology 1
NanoParticle Ontology 61
National Cancer Institute Thesaurus 368
National Center for Biotechnology Information (NCBI) Organismal Classification 11
National Drug Data File 8
National Drug File - Reference Terminology 7
Natural Products Ontology 7
Neomark Oral Cancer Ontology, version 3 5
Neural ElectroMagnetic Ontology 7
Neural Electronic Interface Ontology 17
Neural-Immune Gene Ontology 4,874
NeuralReprogrammingOntology 2
Neuro Behavior Ontology 797
Neurodegenerative Disease Data Ontology 4
Neurologic Examination Ontology 4
NeuroMorpho.Org brain region ontologies 2
Neuron Phenotype Ontology 3
Neuropsychological Integrative Ontology 126
Neuroscience Domain Insight Graph 3
Neuroscience Information Framework (NIF) Dysfunction Ontlogy 4,218
Neuroscience Information Framework (NIF) Standard Ontology 51,703
Neuroscience Information Framework (NIF) Subcellular Ontology 150
Next Generation Biobanking Ontology 2
NGS ontology 2
NIST Genome Editing Lexicon 1
NLighten Ontology 2
NMDC Ontology 3,287
NMR-Controlled Vocabulary 2
NND_Clinical_history 1
Non-coding RNA Ontology 267
Nursing Care Coordination Ontology 2
Obstetric and Neonatal Ontology 103
OCD ontology 231
Ocular Immune-Mediated Inflammatory Diseases Ontology 2
Online Mendelian Inheritance in Man 21
Ontology for Biobanking 5
Ontology for Biomedical Investigations 180
Ontology for Genetic Disease Investigations 6
Ontology for Genetic Interval 5
Ontology for Genetic Susceptibility Factor 12
Ontology for Geography Markup Language (GML3.0) 1
Ontology for MicroRNA Target 488
Ontology for Modeling and Representation of Social Entities 4
Ontology for Newborn Screening Follow-up and Translational Research 13
Ontology for Nutritional Epidemiology 156
Ontology for Nutritional Studies 161
Ontology for Parasite LifeCycle 2
Ontology for Representing CDM Semantics 8
Ontology for the Anatomy of the Insect SkeletoMuscular system 3,343
Ontology of Adverse Events 7
Ontology of Alternative Medicine, French 1
Ontology of amyotrophic lateral sclerosis, social module 3
Ontology of Amyotrophic Lateral Sclerosis, all modules 4
Ontology of Biological and Clinical Statistics 6
Ontology of Biological Attributes 12,153
Ontology of Cardiovascular Drug Adverse Events 7
Ontology of Consumer Health Vocabulary 557
Ontology of Core Data Mining Entities 5
Ontology of Datatypes 3
Ontology of Drug Neuropathy Adverse Events 186
Ontology of Genes and Genomes 4
Ontology of Genes and Genomes - Mouse 2
Ontology of Host-Microbe Interactions 6
Ontology of Host-Pathogen Interactions 107
Ontology of Laboratory Animal Medicine 8
Ontology of Liver for Radiology 1
Ontology of Microbial Phenotypes 91
Ontology of Nuclear Toxicity 18
Ontology of Organizational Structures of Trauma centers and Trauma systems 1
Ontology of Pneumology 1
Ontology of Precision Medicine and Investigation 6
Ontology of Risk Stratification in Mental Health 2
Ontology of RNA Sequencing 5
Ontology of units of Measure 1
Ontology of Vaccine Adverse Events 1
OntoPsychia, social module 5
OpenCareOntology 3
Optimization Algorithm Benchmarking Ontology 1
Orphanet Rare Disease Ontology 1
Orthology Ontology 2
Parasite Experiment Ontology 3
Parkinson and Movement Disorder Ontology 2
Parkinson's Disease Ontology 1
Pathogen Host Interaction Phenotype Ontology 636
Pathway Ontology 46
Pathway Terminology System 257
PatientSafetyOntology 2
PatientSafetyOntologyRevisted 2
Pediatric Terminology 9
Performance Summary Display Ontology 6
Phallusia fumigata Anatomy and Development Ontology 1
Phallusia mammillata Anatomy and Development Ontology 1
Pharmacogenomic Relationships Ontology 7
Phenotypic Quality Ontology 3,167
Phylogenetic Ontology 15
Physical Activity Ontology 1
Physical Medicine and Rehabilitation 6
Physician Data Query 8
Physico-Chemical Methods and Properties 2
Physico-Chemical Process 4
Placental Genetic Variance 3
Placental Investigative Technique 1
Planarian Anatomy and Developmental Stage Ontolgoy 135
Planarian Phenotype Ontology 2,037
Plant Anatomy 18
Plant Breeding Ontology 9
Plant Diversity Ontology 3
Plant Experimental Assay Ontology 3
Plant Experimental Conditions Ontology 7
Plant Gall Ontology 6
Plant Ontology 6
Plant Phenology Ontology 36
Plant Stress Ontology 8
Plant Trait Ontology 5
PLOS Thesaurus 212
PMO Precision Medicine Ontology 39,541
Pneumonia Diagnosis Ontology 1
Population and Community Ontology 12
Porifera Ontology 76
Portfolio Management Application 4
postpartum depression ontology 1
Pre-eclampsia Ontology 26
Precision Medicine Ontology 9
Pregnancy Information Needs Ontology 1
Preposition_enabled Spatial Ontology 1
Probabilistic Knowledge Assembly Ontology 8
Process Chemistry Ontology 6
Prostate Cancer Lifestyle Ontology 1
Prostate Cancer Ontology 2
Protein Ontology 172
Proteomics Data and Process Provenance Ontology 2
Provisional Cell Ontology 5,139
Pseudogene 1
Psychology Ontology 57
Psychometric Ontology of Experiences and Measures 11
Quantities, Units, Dimensions, and Types Ontology 2
Radiation Biology Ontology 3,284
Radiation Oncology Ontology 8
Radiology Gamuts Ontology 10
Radiology Lexicon 13
Radiomics Ontology 1
Rat Strain Ontology 1
Read Clinical Terminology Version 2 3
Read Codes, Clinical Terms Version 3 (CTV3) 52
RegenBase ontology 40
REGN_BRO 5
REGN_GO 51,186
Regulation of Gene Expression Ontolology 14,429
Regulation of Transcription Ontology 14,134
Relations Ontology 6
REPRODUCE-ME 3
Reproductive Trait and Phenotype Ontology 4
Research Variable Ontology 1
Resource of Asian Primary Immunodeficiency Diseases (RAPID) Phenotype Ontology 4
Reusable Biodiversity Ontology 2
RNA Ontology 1
Robert Hoehndorf Version of MeSH 691
RxNORM 7
Sample Processing and Separation Techniques Ontology 1
Santa Barbara Coastal Observation Ontology 3
SATO (IDEAS expAnded wiTh BCIO): workflow for designers of patient-centered mobile health behaviour change intervention applications 8
Schema.org core and all extension vocabularies 2
Scientific Evidence and Provenance Information Ontology 4
Semantic DICOM Ontology 1
Semantic Types Ontology 7
Semantic Web for Earth and Environment Technology Ontology 26
Semanticscience Integrated Ontology 11
Sepsis Ontology 13
Sequence Types and Features Ontology 6
Sickle Cell Disease Ontology 5
Single-Nucleotide Polymorphism (SNP) Ontology 4
Skin Physiology Ontology 36
Sleep Domain Ontology 3
SLEEP ontology 1
SMART Protocols 1
SmartPITeS Proyect Ontology for Complex Chronic Patients 1
SNOMED CT 194
social determinants of health ontology-TaoLab 1
Social Insect Behavior Ontology 1
Software Ontology 6
Solanaceae Phenotype Ontology 1
Soy Ontology 6
Space Life Sciences Ontology 22
Spatial Ontology 3
Spider Anatomy Ontology 18
Spinal Cord Injury Ontology 1
Statistics Ontology 6
STO 11
STress ONtoloGy 1
Student Health Record Ontology 1
Study Cohort Ontology 15
Subcellular Anatomy Ontology 123
Suggested Ontology for Pharmacogenomics 2
suicideonto 1
Symptom Ontology 1
symptomatic treatment of multiple sclerosis ontology 1
Syndromic Surveillance Ontology 1
Synthetic Biology Open Language Visual Ontology 1
Systematized Nomenclature of Medicine, International Version 99
Systems Biology Ontology 8
Taxonomy for Rehabilitation of Knee Conditions 6
Teleost Anatomy Ontology 34
Terminological and Ontological Knowledge Resources Ontology 2
terms4FAIRskills 1
Test NXDX 1
The Amphioxus Development and Anatomy Ontology 6
The Biomarker Ontology 8
The COVID-19 Infectious Disease Ontology 32
The Drug Ontology 10
The Drug-Drug Interactions Ontology 4
The Echinoderm Anatomy and Development Ontology 3,231
The Ecosystem Ontology 5
The Extensible Observation Ontology 1
The FoodOn Food Ontology 23
The Ontology for Biomedical Investigation based Inner Ear Electrophysiology 155
The Prescription of Drugs Ontology 193
The RDF Schema vocabulary 1
The Stroke Ontology 11
Thesaurus for long-term ecological research, monitoring, experiments 34
Thyroid Cancer Ontology 1
Toxic Process Ontology 534
Traditional Chinese Drug Ontology 1
Translational Medicine Ontology 4
Tribolium Ontology 1
Uber Anatomy Ontology 7,434
UHC Metadata 1
Unipathway 46
URL ONTOLOGY 1
Vaccination Informed Consent Ontology 1
Vaccine Ontology 13
Variation Ontology 3
Vertebrate Breed Ontology 4
Vertebrate Homologous Organ Group Ontology 3
Vertebrate Skeletal Anatomy Ontology 27
Vertebrate Trait Ontology 11
Veterans Health Administration National Drug File 7
VEuPathDB Ontology 28
vfb_drivers 6
Viral Disease Ontology Trunk 12
Virus Infectious Disease Ontology 32
Visualized Emotion Ontology 226
Vital Sign Ontology 6
VIVO Ontology for Researcher Discovery 3
VIVO-Integrated Semantic Framework 3
Whole-cell modeling ontology 12
WikiPathways 1
World Health Organization (WHO) Adverse Reaction Terminology 9
Xenopus Anatomy Ontology 43
Xenopus Phenotype Ontology 3,741
Zebrafish Anatomy and Development Ontology 6
Zebrafish Developmental Stages 2
Zebrafish Phenotype Ontology 9,181
ZonMW Administrative Metadata Vocabulary 1
ZonMW COVID-19 2
ZonMw Generic Terms 2
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