Preferred Name

genetic interval

Synonyms
Definitions

the spatial continuous physical entity which contains ordered genomic sets(DNA, RNA, Allele, Marker,etc.) between and including two points(Nucleic_Acid_Base_Residue) on a chromosome or RNA molecule which must have a liner primary sequence sturcture.

ID

http://purl.obolibrary.org/obo/OGI_0000002

alternative term

genomic material interval

genetic material interval

definition

the spatial continuous physical entity which contains ordered genomic sets(DNA, RNA, Allele, Marker,etc.) between and including two points(Nucleic_Acid_Base_Residue) on a chromosome or RNA molecule which must have a liner primary sequence sturcture.

definition source

Yu Lin, Norihiro Sakamoto (2009) “Genome, Gene, Interval and Ontology” Interdisciplinary Ontology Vol.2 - Proceedings of the Second Interdisciplinary Meeting, Tokyo, Feb. 28th- Mar. 1st, 2009. Page(s):25-34 (http://cdb-riken.academia.edu/LinYu/Papers/142399/Genome_Gene_Interval_and_Ontology)

elucidation

It is genomic, so that protein is not the child of this class. it is continuous, so that neither genome(colletive of chormosomes), nor genotype diploid(collective alleles comes from different chromosomes), nor gene family(collective of genes of same homolog located to different chromosomes) are genomic interval. Whereas gene cluster which are juxtapositioned genes can be subclass of genomic interval. By length, the longest Genomic Interval is the interval with same start point and end point with chromosome, and smallest is when one start point and end point are equal( one residue of DNA or RNA). Interval holds property interval relation.

label

genetic interval

prefixIRI

OGI:0000002

prefLabel

genetic interval

disjointWith

http://purl.obolibrary.org/obo/OGI_0000009

http://purl.obolibrary.org/obo/OGI_0000010

subClassOf

http://purl.obolibrary.org/obo/OGI_0000001

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