Ontology of Drug Adverse Events

Last uploaded: January 12, 2019
Preferred Name

brainstem

Synonyms

accessory medullary lamina of pallidum

lamina medullaris incompleta pallidi

lamella pallidi incompleta

brain stem

truncus encephalicus

lamina pallidi incompleta

lamina medullaris accessoria

truncus encephali

Definitions

'brainstem' is a loose term that sometimes refers to the ventral parts o the brain except for any part of the telencephalon - sometimes it includes the diencephalon or subpallial telencephalon structures (ISBN10:0471888893). Here we use it in a more restriced sense, to include only the medulla oblongata, pons (when present) and the midbrain tegmentum (following the ZFA definitions). Stalk-like part of the brain that includes amongst its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain[ZFA,MP,generalized].

ID

http://purl.obolibrary.org/obo/UBERON_0002298

comment

'brainstem' is a loose term that sometimes refers to the ventral parts o the brain except for any part of the telencephalon - sometimes it includes the diencephalon or subpallial telencephalon structures (ISBN10:0471888893). Here we use it in a more restriced sense, to include only the medulla oblongata, pons (when present) and the midbrain tegmentum (following the ZFA definitions).

continuous_with

http://purl.obolibrary.org/obo/UBERON_0002240

contributes to morphology of

http://purl.obolibrary.org/obo/UBERON_0000955

database_cross_reference

ZFA:0001707

MESH:D001933

BAMS:BS

EFO:0001962

TAO:0002156

http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=236

UMLS:C0006121

EMAPA:32678

FMA:79876

MA:0000169

CALOHA:TS-0093

VHOG:0001457

EV:0100241

MBA:343

BTO:0000146

http://www.snomedbrowser.com/Codes/Details/180925009

http://uri.neuinfo.org/nif/nifstd/birnlex_1565

http://en.wikipedia.org/wiki/Brainstem

http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=236

http://linkedlifedata.com/resource/umls/id/C0006121

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12441

depicted_by

http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray719.png

external_definition

Multi-tissue structure that has as its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain[ZFA,adopted][ZFA:0001707].

the stalk-like part of the brain that comprises the midbrain (aka mesencephalon), the pons (aka pons Varolii), and the medulla oblongata, and connects the cerebral hemispheres with the cervical spinal cord[MP]

Multi-tissue structure that has as its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain.[TAO]

has exact synonym

brain stem

truncus encephali

has part

http://purl.obolibrary.org/obo/UBERON_0001943

http://purl.obolibrary.org/obo/UBERON_0001896

has_obo_namespace

uberon

has_related_synonym

accessory medullary lamina of pallidum

lamina medullaris incompleta pallidi

lamella pallidi incompleta

truncus encephalicus

lamina pallidi incompleta

lamina medullaris accessoria

id

UBERON:0002298

imported from

http://purl.obolibrary.org/obo/uberon.owl

http://purl.obolibrary.org/obo/oae.owl

in subset

http://purl.oboInOwllibrary.org/oboInOwl/uberon/core#uberon_slim

http://purl.oboInOwllibrary.org/oboInOwl/uberon#uberon_slim

http://purl.oboInOwllibrary.org/oboInOwl/uberon/core#pheno_slim

http://purl.oboInOwllibrary.org/oboInOwl/uberon#loose_concept

http://purl.oboInOwllibrary.org/oboInOwl/uberon/core#vertebrate_core

http://purl.oboInOwllibrary.org/oboInOwl/uberon#vertebrate_core

http://purl.oboInOwllibrary.org/oboInOwl/uberon/core#efo_slim

label

brainstem

notation

UBERON:0002298

part_of

http://purl.obolibrary.org/obo/UBERON_0000955

prefLabel

brainstem

textual definition

Stalk-like part of the brain that includes amongst its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain[ZFA,MP,generalized].

treeView

http://purl.obolibrary.org/obo/UBERON_0000955

subClassOf

http://purl.obolibrary.org/obo/UBERON_0002616

http://purl.obolibrary.org/obo/UBERON_0010314

spatially_disjoint_from

http://purl.obolibrary.org/obo/UBERON_0002314

http://purl.obolibrary.org/obo/UBERON_0001890

http://purl.obolibrary.org/obo/UBERON_0002037

Delete Subject Author Type Created
No notes to display
Create New Mapping

Delete Mapping To Ontology Source
http://www.purl.org/NDDO/NDDO_20001006 NDDO LOOM
http://www.projecthalo.com/aura#Brainstem AURA LOOM
http://purl.obolibrary.org/obo/BTO_0000146 BTO LOOM
http://purl.obolibrary.org/obo/BTO_0000146 DTO LOOM
http://www.semanticweb.org/ontologies/2009/9/Ontology1255357986125.owl#Brainstem BRCT LOOM
http://www.semanticweb.org/ontologies/STO.owl#b50fc8_8c7a_43cd_8dfc_e287c4b7c010 CVAO LOOM
http://www.semanticweb.org/ontologies/STO.owl#b50fc8_8c7a_43cd_8dfc_e287c4b7c010 STO-DRAFT LOOM
http://scai.fraunhofer.de/MSOntology#Brainstem MSO LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_1565 BIRNLEX LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 GO-PLUS LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 GO-PLUS LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 UBERON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 EFO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 OCMR LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OCMR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 CCONT LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 CCONT SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 ENVO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 ENVO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 GO-PLUS LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 ECOCORE LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 ECOCORE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 EFO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 NBO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 NBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 UBERON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 UPHENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 ZP LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 ZP SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 OCVDAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OCVDAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 CL LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 UBERON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 OBA LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OBA SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 OVAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OVAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 OAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002298 OHPI LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OHPI SAME_URI
http://www.co-ode.org/ontologies/galen#Brainstem GALEN LOOM
http://purl.org/obo/owlapi/fma#FMA_79876 BIOMODELS LOOM
http://purl.bioontology.org/ontology/SNMI/T-A2050 SNMI LOOM
urn:absolute:RadiationOncologyStructuresOntology#Brainstem ROS LOOM
http://scai.fraunhofer.de/AlzheimerOntology#brainstem ADO LOOM
http://localhost/plosthes.2017-1#1507 PLOSTHES LOOM
http://www.semanticweb.org/ontologies/2012/11/abnormalities.owl#phenodb:1813 IFAR LOOM
http://www.semanticweb.org/pallabi.d/ontologies/2014/2/untitled-ontology-11#BrainStem MCCL LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_1565 NIFSTD LOOM
http://www.owl-ontologies.com/OntologyXCT.owl#Brainstem CTX LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D001933 RH-MESH LOOM
http://uri.interlex.org/fsl/uris/atlases/HarvardOxford-Subcortical/labels/7 NIFSTD LOOM
http://api.brain-map.org/api/v2/data/Structure/343 NIFSTD LOOM
http://www.semanticweb.org/rjyy/ontologies/2015/5/ESSO#Brain_Stem ESSO LOOM
http://purl.bioontology.org/ontology/MESH/D001933 MESH LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#A08.186.211.132 RH-MESH LOOM
http://purl.obolibrary.org/obo/TAO_0002156 TAO LOOM
http://mouse.brain-map.org/atlas/index.html#BS ABA-AMB LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#2142 OCHV LOOM
http://purl.obolibrary.org/obo/MA_0000169 MA LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Brain_Stem SYN LOOM
http://regenbase.org/ontology#RB_0000505 RB LOOM
http://purl.obolibrary.org/obo/VHOG_0001457 VHOG LOOM
http://www.semanticweb.org/ontologies/2009/3/ontoDPN.owl#OPPIO_a000307 EPO LOOM
http://purl.jp/bio/4/id/200906076160033323 IOBC LOOM
http://purl.org/sig/ont/fma/fma79876 FMA LOOM
http://purl.org/sig/ont/fma/fma79876 ROO LOOM
http://purl.org/sig/ont/fma/fma79876 RB LOOM
http://purl.bioontology.org/ontology/CSP/0476-5401 CRISP LOOM
http://radlex.org/RID/RID6677 RADLEX LOOM
http://neuromorpho.org/ontologies/vertebrateH.owl#NMOBr_176 NMOBR LOOM
http://neuromorpho.org/ontologies/vertebrateH.owl#NMOBr_176 NMOBR LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0006121 OCHV LOOM
http://purl.bioontology.org/ontology/LNC/LP207337-9 LOINC LOOM
http://purl.bioontology.org/ontology/RCD/7N005 RCD LOOM
http://purl.obolibrary.org/obo/ZFA_0001707 UPHENO LOOM
http://purl.obolibrary.org/obo/ZFA_0001707 ZP LOOM
http://purl.obolibrary.org/obo/ZFA_0001707 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0001707 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0001707 ZFA LOOM
http://www.ifomis.org/acgt/1.0#Brainstem ACGT-MO LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Brain_Stem APANEUROCLUSTER LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Brain_Stem APAONTO LOOM
http://doe-generated-ontology.com/OntoAD#C0006121 ONTOAD LOOM
http://purl.obolibrary.org/obo/EMAPA_32678 EMAPA LOOM
https://bioportal.bioontology.org/ontologies/ICD-O-3-T/C71.7 ICD-O-3-T LOOM
http://uri.interlex.org/waxholm/uris/sd/labels/47 NIFSTD LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12441 NCIT LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12441 NCIT LOOM