Beta Cell Genomics Ontology

Last uploaded: August 20, 2015
Preferred Name

pseudogene
Synonyms
Definitions

A sequence that closely resembles a known functional gene, at another locus within a genome, that is non-functional as a consequence of (usually several) mutations that prevent either its transcription or translation (or both). In general, pseudogenes result from either reverse transcription of a transcript of their "normal" paralog (SO:0000043) (in which case the pseudogene typically lacks introns and includes a poly(A) tail) or from recombination (SO:0000044) (in which case the pseudogene is typically a tandem duplication of its "normal" paralog).

ID

http://purl.obolibrary.org/obo/SO_0000336

definition

A sequence that closely resembles a known functional gene, at another locus within a genome, that is non-functional as a consequence of (usually several) mutations that prevent either its transcription or translation (or both). In general, pseudogenes result from either reverse transcription of a transcript of their "normal" paralog (SO:0000043) (in which case the pseudogene typically lacks introns and includes a poly(A) tail) or from recombination (SO:0000044) (in which case the pseudogene is typically a tandem duplication of its "normal" paralog).

imported from

http://purl.obolibrary.org/obo/so.owl

label

pseudogene

prefixIRI

SO:0000336

prefLabel

pseudogene

subClassOf

http://purl.obolibrary.org/obo/SO_0001411

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Mapping To Ontology Source
http://purl.obolibrary.org/obo/SO_0000336 OMIT SAME_URI
http://purl.obolibrary.org/obo/SO_0000336 SO SAME_URI
http://purl.obolibrary.org/obo/SO_0000336 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/SO_0000336 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/SO_0000336 NCRO SAME_URI
http://purl.bioontology.org/ontology/HGNC/pseudogene HGNC-NR LOOM
http://purl.bioontology.org/ontology/HGNC/pseudogene HRA LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Hugo.owl#pseudogene HGNC LOOM
https://pat.nichd.nih.gov/patgeneticvariance/GV.03.10 PATGV LOOM
http://purl.bioontology.org/ontology/SNMI/F-E0090 SNMI LOOM
http://purl.org/stemnet/MHC#Pseudogene MHC LOOM
http://purl.jp/bio/4/id/200906030907469282 IOBC LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0033799 OCHV LOOM
http://purl.obolibrary.org/obo/OGI.owl#Pseudogene OGI LOOM
http://purl.obolibrary.org/obo/OGI.owl#Pseudogene OGSF LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/76701006 SNOMEDCT LOOM
http://purl.obolibrary.org/obo/OGG_0000000040 OGG LOOM
http://purl.obolibrary.org/obo/OGG_0000000040 OGG-MM LOOM
http://www.semanticweb.org/admin/ontologies/2022/7/MIO:01374 MIO LOOM
http://www.semanticweb.org/admin/ontologies/2022/7/MIO:01374 MIO LOOM
http://www.semanticweb.org/admin/ontologies/2022/7/MIO:01374 MIO LOOM
http://purl.obolibrary.org/obo/ODGI.owl#Pseudogene OGDI LOOM
http://www.imgt.org/download/IMGT-ONTOLOGY/IMGT-ONTOLOGY-v1-0-3.owl#pseudogene IMGT-ONTOLOGY LOOM
http://www.phoc.org.cn/pmo/class/PMO_00086178 PMAPP-PMO LOOM
http://purl.bioontology.org/ontology/CSP/1257-6000 CRISP LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C40415 NCIT LOOM
http://purl.obolibrary.org/obo/SO_0000336 OMIT LOOM
http://purl.obolibrary.org/obo/SO_0000336 SO LOOM
http://purl.obolibrary.org/obo/SO_0000336 GO-PLUS LOOM
http://purl.obolibrary.org/obo/SO_0000336 NIFSTD LOOM
http://purl.obolibrary.org/obo/SO_0000336 NCRO LOOM
http://semanticscience.org/resource/SIO_000988 HASCO LOOM
http://semanticscience.org/resource/SIO_000988 HHEARP LOOM
http://semanticscience.org/resource/SIO_000988 SIO LOOM
http://semanticscience.org/resource/SIO_000988 CHEAR LOOM
http://semanticscience.org/resource/SIO_000988 BIOMO LOOM
http://semanticscience.org/resource/SIO_000988 SCO LOOM
http://semanticscience.org/resource/SIO_000988 HHEAR LOOM
http://semanticscience.org/resource/SIO_000988 POEM LOOM
http://www.projecthalo.com/aura#Pseudogene AURA LOOM
http://purl.obolibrary.org/obo/WC_pseudogene WC LOOM