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Neuroscience Information Framework (NIF) Standard Ontology
Last uploaded:
February 10, 2018
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| Preferred Name | pseudogene | |
| Synonyms |
INSDC_feature:gene INSDC_qualifier:pseudo INSDC_qualifier:unknown |
|
| Definitions |
A sequence that closely resembles a known functional gene, at another locus within a genome, that is non-functional as a consequence of (usually several) mutations that prevent either its transcription or translation (or both). In general, pseudogenes result from either reverse transcription of a transcript of their "normal" paralog (SO:0000043) (in which case the pseudogene typically lacks introns and includes a poly(A) tail) or from recombination (SO:0000044) (in which case the pseudogene is typically a tandem duplication of its "normal" paralog). |
|
| ID |
http://purl.obolibrary.org/obo/SO_0000336 |
|
| alternative label |
INSDC_feature:gene INSDC_qualifier:pseudo INSDC_qualifier:unknown
|
|
| database_cross_reference | ||
| definition |
A sequence that closely resembles a known functional gene, at another locus within a genome, that is non-functional as a consequence of (usually several) mutations that prevent either its transcription or translation (or both). In general, pseudogenes result from either reverse transcription of a transcript of their "normal" paralog (SO:0000043) (in which case the pseudogene typically lacks introns and includes a poly(A) tail) or from recombination (SO:0000044) (in which case the pseudogene is typically a tandem duplication of its "normal" paralog).
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|
| has exact synonym |
INSDC_qualifier:pseudo INSDC_qualifier:unknown
|
|
| has_broad_synonym |
INSDC_feature:gene
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|
| has_obo_namespace |
sequence
|
|
| id |
SO:0000336
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|
| in_subset |
http://purl.obolibrary.org/obo/so#Alliance_of_Genome_Resources |
|
| label |
pseudogene
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|
| non_functional_homolog_of | ||
| notation |
SO:0000336
|
|
| note |
A sequence that closely resembles a known functional gene, at another locus within a genome, that is non-functional as a consequence of (usually several) mutations that prevent either its transcription or translation (or both). In general, pseudogenes result from either reverse transcription of a transcript of their "normal" paralog (SO:0000043) (in which case the pseudogene typically lacks introns and includes a poly(A) tail) or from recombination (SO:0000044) (in which case the pseudogene is typically a tandem duplication of its "normal" paralog).
|
|
| preferred label |
pseudogene
|
|
| prefLabel |
pseudogene
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|
| subClassOf |
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