National Cancer Institute Thesaurus

Last uploaded: February 23, 2024
Preferred Name

Brain Stem

Synonyms

Brainstem structure (body structure)

truncus encephali

Brain, Brain stem

BRAIN, BRAIN STEM

BRAIN STEM

Brain Stem

Brain stem

Brainstem

brain stem

brainstem

Definitions

Three sections, the midbrain, pons and medulla oblongata, that are located at the base of the brain. The brain stem regulates the central nervous system, and is vital as a conduit for motor and sensory innervations.

ID

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12441

ALT_DEFINITION

The part of the brain that connects the cerebral hemispheres with the spinal cord. It consists of the mesencephalon, pons, and medulla oblongata. (NCI)

Stalk-like part of the brain that includes amongst its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain.

The part of the brain that is connected to the spinal cord.

code

C12441

Concept_In_Subset

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C66830

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C157711

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C168656

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C77529

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C77526

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C61410

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C193234

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C198975

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C168660

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C168664

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C168663

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C193006

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C168655

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C74456

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C183102

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C168659

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C177537

Contributing_Source

CDISC

DIPG/DMG

GDC

UBERON

mCode

DEFINITION

Three sections, the midbrain, pons and medulla oblongata, that are located at the base of the brain. The brain stem regulates the central nervous system, and is vital as a conduit for motor and sensory innervations.

Display_Name

Brain Stem

FULL_SYN

Brainstem structure (body structure)

truncus encephali

Brain, Brain stem

BRAIN, BRAIN STEM

BRAIN STEM

Brain Stem

Brain stem

Brainstem

brain stem

brainstem

Is_Value_For_GDC_Property

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C70729

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C171435

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C173263

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C156422

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C156421

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C177570

label

Brain Stem

Legacy Concept Name

Brain_Stem

Maps_To

Brain, Brain stem

Brain Stem

Brain stem

Preferred_Name

Brain Stem

prefixIRI

Thesaurus:C12441

Semantic_Type

Body Part, Organ, or Organ Component

UMLS_CUI

C0006121

xRef

UBERON:0002298

subClassOf

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13031

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0002298 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 DOID LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 PATO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OBA LOOM
https://explaination.net/onto/tree-structure-brain-anatomy-FastSurfer#Brainstem BRAIN-COF LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 CL LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 HOIP LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 GO-PLUS LOOM
http://neuromorpho.org/ontologies/vertebrateH.owl#NMOBr_176 NMOBR LOOM
http://purl.obolibrary.org/obo/VHOG_0001457 VHOG LOOM
http://www.semanticweb.org/rjyy/ontologies/2015/5/ESSO#Brain_Stem ESSO LOOM
http://www.semanticweb.org/rjyy/ontologies/2015/5/ESSO#Brain_Stem MEPO LOOM
http://purl.bioontology.org/ontology/LNC/LP207337-9 LOINC LOOM
http://www.semanticweb.org/ontologies/2009/3/ontoDPN.owl#OPPIO_a000307 EPO LOOM
http://scai.fraunhofer.de/AlzheimerOntology#brainstem ADO LOOM
http://scai.fraunhofer.de/AlzheimerOntology#brainstem NIO LOOM
http://purl.obolibrary.org/obo/EMAPA_32678 EMAPA LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Brain_Stem APANEUROCLUSTER LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Brain_Stem APAONTO LOOM
http://uri.interlex.org/fsl/uris/atlases/HarvardOxford-Subcortical/labels/7 NIFSTD LOOM
http://api.brain-map.org/api/v2/data/Structure/343 NPOKB LOOM
http://api.brain-map.org/api/v2/data/Structure/343 NIFSTD LOOM
http://www.semanticweb.org/ontologies/STO.owl#b50fc8_8c7a_43cd_8dfc_e287c4b7c010 STO-DRAFT LOOM
http://www.semanticweb.org/ontologies/STO.owl#b50fc8_8c7a_43cd_8dfc_e287c4b7c010 CVAO LOOM
http://purl.bioontology.org/ontology/RCD/7N005 RCD LOOM
http://www.owl-ontologies.com/OntologyXCT.owl#Brainstem CTX LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0006121 OCHV LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D001933 RH-MESH LOOM
http://purl.obolibrary.org/obo/MA_0000169 MA LOOM
http://purl.org/obo/owlapi/fma#FMA_79876 BIOMODELS LOOM
http://www.projecthalo.com/aura#Brainstem AURA LOOM
http://purl.obolibrary.org/obo/BTO_0000146 DTO LOOM
http://purl.obolibrary.org/obo/BTO_0000146 BTO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#2142 OCHV LOOM
http://purl.org/sig/ont/fma/fma79876 FMA LOOM
http://purl.org/sig/ont/fma/fma79876 ROO LOOM
http://purl.bioontology.org/ontology/SNMI/T-A2050 SNMI LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 NPOKB LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 RBO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 CLO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OVAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OHPI LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 FOVT LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OCMR LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 XPO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 PCL LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 NIFDYS LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 EPIO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 NBO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 ODAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OCVDAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 KTAO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 MAXO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 CCF LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 FNS-H LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 AISM LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 NMDCO LOOM
http://purl.bioontology.org/ontology/CSP/0476-5401 CRISP LOOM
http://www.co-ode.org/ontologies/galen#Brainstem GALEN LOOM
http://www.purl.org/NDDO/NDDO_20001006 NDDO LOOM
http://purl.obolibrary.org/obo/FMA_79876 NIO LOOM
urn:absolute:RadiationOncologyStructuresOntology#Brainstem ROS LOOM
http://www.semanticweb.org/ontologies/2012/11/abnormalities.owl#phenodb:1813 IFAR LOOM
http://www.ustb.edu.cn/thesauri/tocr/v1/data#C571346494750191618 ACVD_ONTOLOGY LOOM
http://purl.obolibrary.org/obo/ZFA_0001707 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0001707 UPHENO LOOM
http://purl.obolibrary.org/obo/ZFA_0001707 ZP LOOM
http://purl.jp/bio/4/id/200906076160033323 IOBC LOOM
http://regenbase.org/ontology#RB_0000505 RB LOOM
http://purl.obolibrary.org/obo/NCIT_C12441 BERO LOOM
http://scai.fraunhofer.de/MSOntology#Brainstem MSO LOOM
http://purl.obolibrary.org/obo/TAO_0002156 TAO LOOM
http://mouse.brain-map.org/atlas/index.html#BS ABA-AMB LOOM
http://www.ifomis.org/acgt/1.0#Brainstem ACGT-MO LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_1565 BIRNLEX LOOM
http://purl.obolibrary.org/obo/OMIT_0003289 OMIT LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_1565 NIFSTD LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Brain_Stem SYN LOOM
http://www.semanticweb.org/ontologies/2009/9/Ontology1255357986125.owl#Brainstem BRCT LOOM
http://radlex.org/RID/RID6677 RADLEX LOOM
http://localhost/plosthes.2017-1#1507 PLOSTHES LOOM
http://uri.interlex.org/waxholm/uris/sd/labels/47 NIFSTD LOOM
http://doe-generated-ontology.com/OntoAD#C0006121 ONTOAD LOOM
http://purl.bioontology.org/ontology/MESH/D001933 MESH LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#A08.186.211.132 RH-MESH LOOM
http://id.nlm.nih.gov/mesh/D001933 MDM LOOM