National Cancer Institute Thesaurus

Last uploaded: February 23, 2024
Preferred Name

Pseudogene
Synonyms

PSEUDOGENE

Pseudogene

Definitions

Nonfunctional DNA sequences that are very similar to the sequences of known genes. Many seem to have arisen as functional gene duplications that subsequently underwent mutation and loss of function. Others are structurally similar to mRNA and seem to have arisen by a reverse transcription event followed by integration into the genome. Some pseudogenes are transcribed and may play a role in regulation of its homologous gene.

ID

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C40415

ALT_DEFINITION

Genomic DNA sequences that are similar to protein-coding genes but do not encode a functional protein. (HGNC)

code

C40415

Concept_In_Subset

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C66830

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C61410

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C181176

Contributing_Source

CDISC

DEFINITION

Nonfunctional DNA sequences that are very similar to the sequences of known genes. Many seem to have arisen as functional gene duplications that subsequently underwent mutation and loss of function. Others are structurally similar to mRNA and seem to have arisen by a reverse transcription event followed by integration into the genome. Some pseudogenes are transcribed and may play a role in regulation of its homologous gene.

FULL_SYN

PSEUDOGENE

Pseudogene

label

Pseudogene

Legacy Concept Name

Pseudogene

Preferred_Name

Pseudogene

prefixIRI

Thesaurus:C40415

Semantic_Type

Classification

UMLS_CUI

C0033799

subClassOf

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C19896

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Mapping To Ontology Source
http://purl.bioontology.org/ontology/HGNC/pseudogene HGNC-NR LOOM
http://purl.bioontology.org/ontology/HGNC/pseudogene HRA LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Hugo.owl#pseudogene HGNC LOOM
https://pat.nichd.nih.gov/patgeneticvariance/GV.03.10 PATGV LOOM
http://purl.bioontology.org/ontology/SNMI/F-E0090 SNMI LOOM
http://purl.org/stemnet/MHC#Pseudogene MHC LOOM
http://purl.jp/bio/4/id/200906030907469282 IOBC LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0033799 OCHV LOOM
http://purl.obolibrary.org/obo/OGI.owl#Pseudogene OGI LOOM
http://purl.obolibrary.org/obo/OGI.owl#Pseudogene OGSF LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/76701006 SNOMEDCT LOOM
http://purl.obolibrary.org/obo/OGG_0000000040 OGG LOOM
http://purl.obolibrary.org/obo/OGG_0000000040 OGG-MM LOOM
http://www.semanticweb.org/admin/ontologies/2022/7/MIO:01374 MIO LOOM
http://www.semanticweb.org/admin/ontologies/2022/7/MIO:01374 MIO LOOM
http://www.semanticweb.org/admin/ontologies/2022/7/MIO:01374 MIO LOOM
http://purl.obolibrary.org/obo/ODGI.owl#Pseudogene OGDI LOOM
http://www.imgt.org/download/IMGT-ONTOLOGY/IMGT-ONTOLOGY-v1-0-3.owl#pseudogene IMGT-ONTOLOGY LOOM
http://www.phoc.org.cn/pmo/class/PMO_00086178 PMAPP-PMO LOOM
http://purl.bioontology.org/ontology/CSP/1257-6000 CRISP LOOM
http://purl.obolibrary.org/obo/SO_0000336 OMIT LOOM
http://purl.obolibrary.org/obo/SO_0000336 SO LOOM
http://purl.obolibrary.org/obo/SO_0000336 OBI_BCGO LOOM
http://purl.obolibrary.org/obo/SO_0000336 GO-PLUS LOOM
http://purl.obolibrary.org/obo/SO_0000336 NIFSTD LOOM
http://purl.obolibrary.org/obo/SO_0000336 NCRO LOOM
http://semanticscience.org/resource/SIO_000988 HASCO LOOM
http://semanticscience.org/resource/SIO_000988 HHEARP LOOM
http://semanticscience.org/resource/SIO_000988 SIO LOOM
http://semanticscience.org/resource/SIO_000988 CHEAR LOOM
http://semanticscience.org/resource/SIO_000988 BIOMO LOOM
http://semanticscience.org/resource/SIO_000988 SCO LOOM
http://semanticscience.org/resource/SIO_000988 HHEAR LOOM
http://semanticscience.org/resource/SIO_000988 POEM LOOM
http://www.projecthalo.com/aura#Pseudogene AURA LOOM
http://purl.obolibrary.org/obo/WC_pseudogene WC LOOM