Molecular Interactions

Last uploaded: June 17, 2024
Preferred Name

bar

Synonyms

bar-arabidopsis interactions viewer

Definitions

The Arabidopsis Interactions Viewer of BAR (the Bio-Array Resource for plant biology) queries a database of 70944 predicted and 28556 confirmed Arabidopsis interacting proteins. The predicted interactions (interologs) were generated by Drs Matt Geisler and Jane Geisler-Lee at the Southern Illinois University. Their current version is Interactome 2.0. The confirmed Arabidopsis interacting proteins come from BIND, the Biomolecular Interaction Network Database, from high-density Arabidopsis protein microarrays, from Braun et al.'s Arabidopsis Interactome 2011 , from Wolf Frommer's Membrane protein INteractome Database MIND, from Etsuko Moryiama's Arabidopsis G-signaling Interactome Database, and over 1190 other literature sources. The interactions in BIND were identified using several different methods, such as yeast two hybrid screens, but also via traditional biochemical methods. http://bar.utoronto.ca/interactions/cgi-bin/arabidopsis_interactions_viewer.cgi" [PMID:15960624]

ID

http://purl.obolibrary.org/obo/MI_2165

created_by

orchard

creation_date

2013-02-26T12:49:13Z

definition

The Arabidopsis Interactions Viewer of BAR (the Bio-Array Resource for plant biology) queries a database of 70944 predicted and 28556 confirmed Arabidopsis interacting proteins. The predicted interactions (interologs) were generated by Drs Matt Geisler and Jane Geisler-Lee at the Southern Illinois University. Their current version is Interactome 2.0. The confirmed Arabidopsis interacting proteins come from BIND, the Biomolecular Interaction Network Database, from high-density Arabidopsis protein microarrays, from Braun et al.'s Arabidopsis Interactome 2011 , from Wolf Frommer's Membrane protein INteractome Database MIND, from Etsuko Moryiama's Arabidopsis G-signaling Interactome Database, and over 1190 other literature sources. The interactions in BIND were identified using several different methods, such as yeast two hybrid screens, but also via traditional biochemical methods. http://bar.utoronto.ca/interactions/cgi-bin/arabidopsis_interactions_viewer.cgi" [PMID:15960624]

has_exact_synonym

bar-arabidopsis interactions viewer

has_obo_namespace

PSI-MI

id

MI:2165

in_subset

http://purl.obolibrary.org/obo/mi#PSI-MI_slim

label

bar

notation

MI:2165

prefLabel

bar

treeView

http://purl.obolibrary.org/obo/MI_0461

subClassOf

http://purl.obolibrary.org/obo/MI_0461

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http://www.ebi.ac.uk/swo/data/SWO_3000058 MCRO LOOM
https://w3id.org/CMECS/CMECS_00000077 CMECS LOOM
http://www.ebi.ac.uk/swo/data/SWO_3000058 SWO LOOM
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http://semanticscience.org/resource/SIO_000519 BIOMO LOOM
http://semanticscience.org/resource/SIO_000519 SCO LOOM
http://semanticscience.org/resource/SIO_000519 HHEAR LOOM
http://semanticscience.org/resource/SIO_000519 HASCO LOOM
http://purl.obolibrary.org/obo/ENVO_00000167 BERO LOOM
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http://purl.obolibrary.org/obo/ENVO_00000167 ENVO LOOM
http://purl.obolibrary.org/obo/ENVO_00000167 FNS-H LOOM
http://purl.obolibrary.org/obo/ENVO_00000167 NMDCO LOOM
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http://purl.obolibrary.org/obo/GAZ_00396819 GAZ LOOM
http://semanticscience.org/resource/bar MATERIALSMINE LOOM
https://w3id.org/CMECS/CMECS_00000077 CMECSTTL LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/429885007 SNOMEDCT LOOM
http://sweetontology.net/realmLandCoastal/Bar SWEET LOOM
http://purl.jp/bio/11/meo/MEO_0001594 MEO LOOM
http://purl.bioontology.org/ontology/NDDF/EB NDDF LOOM
http://purl.obolibrary.org/obo/WBbt_0007059 WB-BT LOOM
http://purl.obolibrary.org/obo/HAO_0000164 HAO LOOM