Kidney Tissue Atlas Ontology

Last uploaded: March 16, 2024
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Preferred Name

COL1A1
Synonyms

OI4
Definitions

Other designations: alpha-1 type I collagen|collagen alpha 1 chain type I|collagen alpha-1(I) chain|collagen alpha-1(I) chain preproprotein|collagen of skin, tendon and bone, alpha-1 chain|pro-alpha-1 collagen type 1
ID

http://purl.obolibrary.org/obo/OGG_3000001277
comment

Other designations: alpha-1 type I collagen|collagen alpha 1 chain type I|collagen alpha-1(I) chain|collagen alpha-1(I) chain preproprotein|collagen of skin, tendon and bone, alpha-1 chain|pro-alpha-1 collagen type 1
Description

collagen, type I, alpha 1
alternative term

OI4
chromosome ID of gene

17
database_cross_reference

Vega:OTTHUMG00000148674

HPRD:00362

HGNC:2197

Ensembl:ENSG00000108821

MIM:120150
definition source

WEB: http://www.ncbi.nlm.nih.gov/gene
full name from nomenclature authority

collagen, type I, alpha 1
gene map location

17q21.33
has GO association

GO_0001501 (EC: IMP, PMID: 14976317); GO_0001568 (EC: IMP, PMID: 17211858); GO_0001649 (EC: IEA); GO_0001957 (EC: IEA); GO_0001958 (EC: IEA); GO_0005201 (EC: IEA); GO_0005515 (EC: IPI, PMID: 14749390); GO_0005576 (EC: TAS); GO_0005584 (EC: IMP, PMID: 14976317); GO_0005615 (EC: IDA); GO_0005788 (EC: TAS); GO_0007584 (EC: IEA); GO_0007596 (EC: TAS); GO_0007601 (EC: IMP, PMID: 17557158); GO_0007605 (EC: IMP, PMID: 17489845); GO_0010718 (EC: IDA); GO_0010812 (EC: IEA); GO_0015031 (EC: IEA); GO_0022617 (EC: TAS); GO_0030168 (EC: TAS); GO_0030198 (EC: TAS); GO_0030199 (EC: IMP, PMID: 14976317); GO_0030335 (EC: IDA); GO_0030574 (EC: TAS); GO_0031012 (EC: IDA, Qualifier: colocalizes_with); GO_0031012 (EC: ISS, Qualifier: colocalizes_with); GO_0031960 (EC: IEA); GO_0032355 (EC: IEA); GO_0032964 (EC: IMP, PMID: 15095409); GO_0034504 (EC: IDA); GO_0034505 (EC: IMP, PMID: 17118335); GO_0042542 (EC: IEA); GO_0042802 (EC: IDA, PMID: 17211858); GO_0043434 (EC: IEA); GO_0043589 (EC: IMP, PMID: 17211858); GO_0045893 (EC: IDA); GO_0046872 (EC: IEA); GO_0048407 (EC: IDA, PMID: 8900172); GO_0048706 (EC: IMP, PMID: 18553566); GO_0050900 (EC: TAS); GO_0051591 (EC: IEA); GO_0060325 (EC: IEA); GO_0060346 (EC: IEA); GO_0060351 (EC: IEA); GO_0070208 (EC: IEA); GO_0071230 (EC: IEA); GO_0071260 (EC: IEA); GO_0071300 (EC: IEA); GO_0071560 (EC: IEA); GO_0090263 (EC: IDA)
has PubMed association

PMID: 1303238; 1339453; 1377218; 1409674; 1460047; 1468447; 1511982; 1613761; 1634225; 1693626; 1715582; 1718984; 1730778; 1737847; 1770532; 1787829; 1870989; 1874719; 1895312; 1939261; 1939645; 1953667; 1988452; 1995349; 2010058; 2035536; 2036375; 2037280; 2116413; 2156854; 2169412; 2211725; 2295701; 2318855; 2339700; 2374517; 2446864; 2468670; 2470760; 2511192; 2745420; 2745554; 2767050; 2777764; 2794057; 2822714; 2843432; 2857713; 2913053; 2981843; 3016737; 3082886; 3108247; 3170557; 3178743; 3244312; 3264153; 3340531; 3403550; 3480516; 3490481; 3571333; 3667599; 3722186; 3857213; 3857621; 3872140; 4319110; 5529814; 6183642; 6292910; 6320112; 6462220; 6689127; 7034958; 7499207; 7520724; 7679635; 7691343; 7852349; 7881420; 7945553; 7961597; 7982948; 8019571; 8094076; 8097422; 8100209; 8223589; 8339541; 8349697; 8349698; 8364588; 8456808; 8456809; 8468356; 8552450; 8669434; 8723681; 8786074; 8841196; 8900172; 8988177; 9016532; 9028946; 9067755; 9101290; 9101304; 9143923; 9169408; 9239397; 9280292; 9295288; 9443882; 9600458; 9639571; 9659899; 9675033; 9733643; 9878537; 10408781; 10446987; 10627137; 10739762; 10772928; 10778855; 11085801; 11090261; 11122085; 11136533; 11143996; 11173011; 11204438; 11230734; 11283002; 11303720; 11311202; 11316004; 11359786; 11368514; 11383910; 11420783; 11432962; 11508783; 11547828; 11547832; 11566920; 11668615; 11683425; 11685422; 11716195; 11731270; 11752017; 11792589; 11847210; 11856343; 11867580; 11874231; 11907712; 11973338; 12016463; 12016466; 12034531; 12034705; 12069607; 12072442; 12073153; 12096841; 12099690; 12101112; 12107666; 12127408; 12138160; 12149247; 12164934; 12180907; 12185380; 12200454; 12211646; 12232678; 12358155; 12393937; 12477932; 12491092; 12524166; 12575457; 12584032; 12590186; 12660034; 12735930; 12753258; 12787275; 12803121; 12810179; 12868700; 12879219; 14506618; 14528100; 14562991; 14595528; 14613485; 14633859; 14643521; 14672895; 14722584; 14734826; 14749390; 14976317; 15049048; 15081423; 15085313; 15095409; 15101818; 15106082; 15133851; 15211650; 15227656; 15241219; 15241796; 15256976; 15365990; 15466008; 15489334; 15514164; 15514891; 15552843; 15570400; 15581348; 15592793; 15638371; 15728585; 15781005; 15788405; 15794927; 15805113; 15880349; 15950180; 15952128; 15965952; 15966503; 15994869; 16001263; 16009674; 16102727; 16159929; 16171977; 16173077; 16263577; 16272059; 16278217; 16407265; 16410344; 16458627; 16475872; 16498072; 16521042; 16540720; 16580273; 16622736; 16705691; 16713399; 16723701; 16804049; 16815299; 16831952; 16835341; 16864092; 16869454; 16911569; 16934803; 16988190; 17019952; 17021946; 17028262; 17100549; 17118335; 17135298; 17140440; 17179726; 17187960; 17201588; 17211858; 17252541; 17273809; 17276428; 17303000; 17331078; 17332715; 17392686; 17460886; 17489845; 17551768; 17554369; 17557158; 17576241; 17698844; 17766609; 17875077; 17876648; 17889845; 17903305; 17950782; 17991736; 18024269; 18028452; 18069662; 18089612; 18226133; 18298657; 18306915; 18311573; 18323784; 18353721; 18361931; 18375391; 18379465; 18380967; 18401458; 18412368; 18536987; 18550494; 18551240; 18553566; 18580957; 18619040; 18634290; 18644377; 18669583; 18669982; 18670065; 18681778; 18682895; 18694864; 18703872; 18704262; 18709850; 18787532; 18818748; 18836165; 18925325; 18996919; 19016596; 19019335; 19031824; 19071236; 19082910; 19110771; 19143970; 19145934; 19172220; 19180518; 19193663; 19193665; 19206162; 19255718; 19259350; 19260140; 19299182; 19306436; 19322201; 19341834; 19358256; 19387081; 19418583; 19429913; 19453261; 19465003; 19491628; 19506792; 19527514; 19558215; 19595020; 19635106; 19655227; 19675556; 19714363; 19718407; 19734317; 19751715; 19789904; 19813243; 19861282; 19890351; 19893454; 19913121; 19913496; 19929435; 19932771; 20015871; 20045402; 20061935; 20063990; 20087402; 20133221; 20140262; 20146006; 20146870; 20181574; 20191437; 20235194; 20237151; 20301422; 20301472; 20359090; 20369485; 20379614; 20406730; 20435445; 20444423; 20452482; 20463013; 20489157; 20509788; 20532479; 20543003; 20571774; 20628086; 20651840; 20673868; 20693403; 20704113; 20721936; 20724381; 20730440; 20736093; 20798928; 20961463; 21029365; 21033393; 21042785; 21085489; 21095332; 21111450; 21113976; 21134900; 21139048; 21163673; 21178584; 21215393; 21302452; 21311138; 21336691; 21341209; 21343850; 21344539; 21405976; 21462477; 21535073; 21558934; 21564311; 21602843; 21647970; 21667357; 21702901; 21713451; 21746880; 21764694; 21777208; 21834035; 21935919; 21963094; 21970315; 22054507; 22057139; 22130917; 22139845; 22174012; 22190259; 22210296; 22219633; 22249249; 22297492; 22337942; 22367096; 22379029; 22422640; 22434650; 22479424; 22489040; 22565191; 22576977; 22645275; 22679784; 22694915; 22829018; 22855962; 22871215; 22939629; 22987783; 22990118; 23006423; 23013730; 23040566; 23068445; 23079818; 23137636; 23159876; 23199263; 23207290; 23276824; 23314748; 23338998; 23341452; 23344861; 23418565; 23418792; 23529829; 23546968; 23548228; 23592926; 23624467; 23639859; 23653354; 23692737; 23731614; 23763354; 23800666; 23906792; 23918805; 24170657; 24227918
imported from

http://purl.obolibrary.org/obo/ogg.owl
is gene marker of cell

http://purl.obolibrary.org/obo/CL_0000057

http://purl.obolibrary.org/obo/CL_0000186
label

COL1A1
modification date

20140408
NCBI GeneID

1277
nomenclature status

Official from a nomenclature committee
organism NCBITaxon ID

9606
part_of

http://purl.obolibrary.org/obo/GO_0005615

http://purl.obolibrary.org/obo/GO_0016021

http://purl.obolibrary.org/obo/GO_0005576

http://purl.obolibrary.org/obo/GO_0031012
participates_in

http://purl.obolibrary.org/obo/GO_0050776

http://purl.obolibrary.org/obo/GO_0007155

http://purl.obolibrary.org/obo/GO_0032355

http://purl.obolibrary.org/obo/GO_0030335

http://purl.obolibrary.org/obo/GO_0030198

http://purl.obolibrary.org/obo/GO_0071356
prefixIRI

OGG:3000001277
prefLabel

COL1A1
symbol from nomenclature authority

COL1A1
term editor

Bin Zhao, Yue Liu, Oliver He
treeView

http://purl.obolibrary.org/obo/GO_0005615

http://purl.obolibrary.org/obo/GO_0016021

http://purl.obolibrary.org/obo/GO_0005576

http://purl.obolibrary.org/obo/GO_0031012
subClassOf

http://purl.obolibrary.org/obo/OGG_2060009606
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