Human Interaction Network Ontology

Last uploaded: June 27, 2014
Preferred Name

Interferon gamma signaling
Synonyms
Definitions

Authored: Garapati, P V, 2010-06-08 Interferon-gamma (IFN-gamma) belongs to the type II interferon family and is secreted by activated immune cells-primarily T and NK cells, but also B-cells and APC. INFG exerts its effect on cells by interacting with the specific IFN-gamma receptor (IFNGR). IFNGR consists of two chains, namely IFNGR1 (also known as the IFNGR alpha chain) and IFNGR2 (also known as the IFNGR beta chain). IFNGR1 is the ligand binding receptor and is required but not sufficient for signal transduction, whereas IFNGR2 do not bind IFNG independently but mainly plays a role in IFNG signaling and is generally the limiting factor in IFNG responsiveness. Both IFNGR chains lack intrinsic kinase/phosphatase activity and thus rely on other signaling proteins like Janus-activated kinase 1 (JAK1), JAK2 and Signal transducer and activator of transcription 1 (STAT-1) for signal transduction. IFNGR complex in its resting state is a preformed tetramer and upon IFNG association undergoes a conformational change. This conformational change induces the phosphorylation and activation of JAK1, JAK2, and STAT1 which in turn induces genes containing the gamma-interferon activation sequence (GAS) in the promoter. Edited: Garapati, P V, 2010-06-08 Reviewed: Abdul-Sater, AA, Schindler, C, 2010-08-17

ID

http://purl.obolibrary.org/obo/HINO_0022255

comment

Authored: Garapati, P V, 2010-06-08

Interferon-gamma (IFN-gamma) belongs to the type II interferon family and is secreted by activated immune cells-primarily T and NK cells, but also B-cells and APC. INFG exerts its effect on cells by interacting with the specific IFN-gamma receptor (IFNGR). IFNGR consists of two chains, namely IFNGR1 (also known as the IFNGR alpha chain) and IFNGR2 (also known as the IFNGR beta chain). IFNGR1 is the ligand binding receptor and is required but not sufficient for signal transduction, whereas IFNGR2 do not bind IFNG independently but mainly plays a role in IFNG signaling and is generally the limiting factor in IFNG responsiveness. Both IFNGR chains lack intrinsic kinase/phosphatase activity and thus rely on other signaling proteins like Janus-activated kinase 1 (JAK1), JAK2 and Signal transducer and activator of transcription 1 (STAT-1) for signal transduction. IFNGR complex in its resting state is a preformed tetramer and upon IFNG association undergoes a conformational change. This conformational change induces the phosphorylation and activation of JAK1, JAK2, and STAT1 which in turn induces genes containing the gamma-interferon activation sequence (GAS) in the promoter.

Edited: Garapati, P V, 2010-06-08

Reviewed: Abdul-Sater, AA, Schindler, C, 2010-08-17

definition source

Pubmed14525967

Pubmed9143700

Reactome, http://www.reactome.org

Pubmed18929502

Pubmed9462485

label

Interferon gamma signaling

located_in

http://purl.obolibrary.org/obo/NCBITaxon_9606

prefixIRI

HINO:0022255

prefLabel

Interferon gamma signaling

seeAlso

Reactome Database ID Release 43877300

ReactomeREACT_25078

GENE ONTOLOGYGO:0060333

subClassOf

http://purl.obolibrary.org/obo/INO_0000021

has_part

http://purl.obolibrary.org/obo/HINO_0007171

http://purl.obolibrary.org/obo/HINO_0007172

http://purl.obolibrary.org/obo/HINO_0007112

http://purl.obolibrary.org/obo/HINO_0007114

http://purl.obolibrary.org/obo/HINO_0007113

http://purl.obolibrary.org/obo/HINO_0007110

http://purl.obolibrary.org/obo/HINO_0007115

http://purl.obolibrary.org/obo/HINO_0007111

http://purl.obolibrary.org/obo/HINO_0022260

http://purl.obolibrary.org/obo/HINO_0007108

http://purl.obolibrary.org/obo/HINO_0007109

http://purl.obolibrary.org/obo/HINO_0007107

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