Human Interaction Network Ontology

Last uploaded: June 27, 2014
Preferred Name

mRNA Editing
Synonyms
Definitions

After transcription, some RNA molecules are altered to contain bases not encoded in the genome. Most often this involves the editing or modification of one base to another, but in some organisms can involve the insertion or deletion of a base. Such editing events alter the coding properties of mRNA.<BR>RNA editing can be generally defined as the co- or post transcriptional modification of the primary sequence of RNA from that encoded in the genome through nucleotide deletion, insertion, or base modification mechanisms.<BR>There are two pathways of RNA editing: the substitution/conversion pathway and the insertion/deletion pathway. The insertion/deletion editing occurs in protozoans like Trypanosoma, Leishmania; in slime molds like Physarum spp., and in some viral categories like paramyxoviruses, Ebola virus etc. To date, the substitution/conversion pathway has been observed in human along with other mammals, Drosophila, and some plants. The RNA editing processes are known to create diversity in proteins involved in various pathways like lipid transport, metabolism etc. and may act as potential targets for therapeutic intervention (Smith et al., 1997).<BR>The reaction mechanisms of cytidine and adenosine deaminases is represented below. In both these reactions, NH3 is presumed to be released:<BR> Authored: Carmichael, GG, 2003-08-22 09:59:54 Edited: Gopinathrao, G, 0000-00-00 00:00:00

ID

http://purl.obolibrary.org/obo/HINO_0021090

comment

After transcription, some RNA molecules are altered to contain bases not encoded in the genome. Most often this involves the editing or modification of one base to another, but in some organisms can involve the insertion or deletion of a base. Such editing events alter the coding properties of mRNA.
RNA editing can be generally defined as the co- or post transcriptional modification of the primary sequence of RNA from that encoded in the genome through nucleotide deletion, insertion, or base modification mechanisms.
There are two pathways of RNA editing: the substitution/conversion pathway and the insertion/deletion pathway. The insertion/deletion editing occurs in protozoans like Trypanosoma, Leishmania; in slime molds like Physarum spp., and in some viral categories like paramyxoviruses, Ebola virus etc. To date, the substitution/conversion pathway has been observed in human along with other mammals, Drosophila, and some plants. The RNA editing processes are known to create diversity in proteins involved in various pathways like lipid transport, metabolism etc. and may act as potential targets for therapeutic intervention (Smith et al., 1997).
The reaction mechanisms of cytidine and adenosine deaminases is represented below. In both these reactions, NH3 is presumed to be released:

Authored: Carmichael, GG, 2003-08-22 09:59:54

Edited: Gopinathrao, G, 0000-00-00 00:00:00

definition source

Pubmed12139607

Reactome, http://www.reactome.org

Pubmed11092837

label

mRNA Editing

located_in

http://purl.obolibrary.org/obo/NCBITaxon_9606

prefixIRI

HINO:0021090

prefLabel

mRNA Editing

seeAlso

Reactome Database ID Release 4375072

ReactomeREACT_1757

GENE ONTOLOGYGO:0016556

subClassOf

http://purl.obolibrary.org/obo/INO_0000021

has_part

http://purl.obolibrary.org/obo/HINO_0021091

http://purl.obolibrary.org/obo/HINO_0021089

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http://scai.fraunhofer.de/PWDICT#ID2162 PTS LOOM