Human Interaction Network Ontology

Last uploaded: June 27, 2014
Preferred Name

Initial proteolyis of Ii by aspartic proteases to lip22
Synonyms
Definitions

Authored: Garapati, P V, 2012-02-21 Edited: Garapati, P V, 2012-02-21 Within acidic endocytic compartments Ii is proteolytically cleaved, ultimately freeing the class II peptide-binding groove for loading of antigenic peptides. Ii is degraded in a stepwise manner by a combination of aspartyl and cysteine proteases, following a well defined path with intermediates lip22, lip10 and finally CLIP. The initial Ii cleavage has been ascribed to leupeptin-insensitive cysteine or aspartic proteases, which include aspartyl protease and asparagine endopeptidase (AEP) (Maric et al. 1994, Manoury et al. 2003, Costantino et al. 2008). These proteases generate 22 kDa fragments of Ii (lip22). The trimerization domain of human Ii (residues 134-208) has three possible AEP cleavage sites, Asn148, 165 and 171. Asn171, located at the C-terminal end of helix B, is the demonstrated cleavage site for AEP (Manoury et al. 2003, Jasanoff et al. 1998). This cleavage eliminates the C-terminal trimerization domain of Ii, which causes disassociation of the (MHC II:Ii)3 nonamer and exposes new cleavage sites in the MHC II:lip22 trimers (Villadangos et al. 1999, Guillaume et al. 2008). The residue numbering of Ii given above is based on Uniprot isoform 1. Reviewed: Neefjes, Jacques, 2012-05-14

ID

http://purl.obolibrary.org/obo/HINO_0018124

comment

Authored: Garapati, P V, 2012-02-21

Edited: Garapati, P V, 2012-02-21

Within acidic endocytic compartments Ii is proteolytically cleaved, ultimately freeing the class II peptide-binding groove for loading of antigenic peptides. Ii is degraded in a stepwise manner by a combination of aspartyl and cysteine proteases, following a well defined path with intermediates lip22, lip10 and finally CLIP. The initial Ii cleavage has been ascribed to leupeptin-insensitive cysteine or aspartic proteases, which include aspartyl protease and asparagine endopeptidase (AEP) (Maric et al. 1994, Manoury et al. 2003, Costantino et al. 2008). These proteases generate 22 kDa fragments of Ii (lip22). The trimerization domain of human Ii (residues 134-208) has three possible AEP cleavage sites, Asn148, 165 and 171. Asn171, located at the C-terminal end of helix B, is the demonstrated cleavage site for AEP (Manoury et al. 2003, Jasanoff et al. 1998). This cleavage eliminates the C-terminal trimerization domain of Ii, which causes disassociation of the (MHC II:Ii)3 nonamer and exposes new cleavage sites in the MHC II:lip22 trimers (Villadangos et al. 1999, Guillaume et al. 2008). The residue numbering of Ii given above is based on Uniprot isoform 1.

Reviewed: Neefjes, Jacques, 2012-05-14

definition source

Pubmed8134367

Reactome, http://www.reactome.org

Pubmed18582577

Pubmed10631941

Pubmed9843486

Pubmed18292509

has input

http://purl.obolibrary.org/obo/HINO_0004240

has output

http://purl.obolibrary.org/obo/HINO_0004506

label

Initial proteolyis of Ii by aspartic proteases to lip22

prefixIRI

HINO:0018124

prefLabel

Initial proteolyis of Ii by aspartic proteases to lip22

seeAlso

ReactomeREACT_121251

Reactome Database ID Release 432130336

EC Number: 3.4.22

subClassOf

http://purl.obolibrary.org/obo/INO_0000040

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