Fission Yeast Phenotype Ontology

Last uploaded: November 28, 2024
Preferred Name

cytidine
Synonyms

1beta-D-ribofuranosylcytosine

4-amino-1beta-D-ribofuranosyl-2(1H)-pyrimidinone

1-beta-D-Ribofuranosylcytosine

cytosine-1beta-D-Ribofuranoside

4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE

4-amino-1-beta-D-ribofuranosylpyrimidin-2(1H)-one

Cytosine riboside

Cyd

Cytidin

Zytidin

Cytidine

cytidine

Definitions

A pyrimidine nucleoside in which cytosine is attached to ribofuranose via a beta-N(1)-glycosidic bond.

ID

http://purl.obolibrary.org/obo/CHEBI_17562

charge

0

database_cross_reference

PMID:12591866

HMDB:HMDB0000089

Beilstein:89173

CAS:65-46-3

PMID:15621516

Wikipedia:Cytidine

PDBeChem:CTN

MetaCyc:CYTIDINE

Gmelin:84763

DrugBank:DB02097

KEGG:D07769

PMID:19194376

Reaxys:89173

KEGG:C00475

definition

A pyrimidine nucleoside in which cytosine is attached to ribofuranose via a beta-N(1)-glycosidic bond.

formula

C9H13N3O5

has characteristic

http://purl.obolibrary.org/obo/CHEBI_75772

http://purl.obolibrary.org/obo/CHEBI_77746

http://purl.obolibrary.org/obo/CHEBI_75771

http://purl.obolibrary.org/obo/CHEBI_76971

has role

http://purl.obolibrary.org/obo/CHEBI_75772

http://purl.obolibrary.org/obo/CHEBI_77746

http://purl.obolibrary.org/obo/CHEBI_75771

http://purl.obolibrary.org/obo/CHEBI_76971

has_alternative_id

CHEBI:41686

CHEBI:14063

CHEBI:41649

CHEBI:23515

CHEBI:41704

CHEBI:4053

has_exact_synonym

Cytidine

cytidine

has_obo_namespace

chebi_ontology

has_related_synonym

1beta-D-ribofuranosylcytosine

4-amino-1beta-D-ribofuranosyl-2(1H)-pyrimidinone

1-beta-D-Ribofuranosylcytosine

cytosine-1beta-D-Ribofuranoside

4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE

4-amino-1-beta-D-ribofuranosylpyrimidin-2(1H)-one

Cytosine riboside

Cyd

Cytidin

Zytidin

id

CHEBI:17562

in_subset

http://purl.obolibrary.org/obo/chebi#3_STAR

inchi

InChI=1S/C9H13N3O5/c10-5-1-2-12(9(16)11-5)8-7(15)6(14)4(3-13)17-8/h1-2,4,6-8,13-15H,3H2,(H2,10,11,16)/t4-,6-,7-,8-/m1/s1

inchikey

UHDGCWIWMRVCDJ-XVFCMESISA-N

label

cytidine

mass

243.21674

monoisotopicmass

243.08552

notation

CHEBI:17562

prefLabel

cytidine

smiles

Nc1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1

subClassOf

http://purl.obolibrary.org/obo/CHEBI_23524

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Mapping To Ontology Source
http://purl.obolibrary.org/obo/CHEBI_17562 DRON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17562 PDRO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17562 BIPON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17562 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17562 BERO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17562 DDSS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17562 BIOMODELS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17562 CIDO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17562 CHEBI SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17562 HINO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17562 MCO SAME_URI
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D13.570.685.245 RH-MESH LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C409 NCIT LOOM
http://purl.obolibrary.org/obo/NCIT_C409 BERO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D03.383.742.680.245 RH-MESH LOOM
http://www.phoc.org.cn/pmo/class/PMO_00018382 PMAPP-PMO LOOM
http://doe-generated-ontology.com/OntoAD#C0010715 ONTOAD LOOM
http://purl.bioontology.org/ontology/NDDF/005771 NDDF LOOM
http://purl.obolibrary.org/obo/OMIT_0004848 OMIT LOOM
http://purl.jp/bio/4/id/200906011873274857 IOBC LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D003562 RH-MESH LOOM
http://purl.obolibrary.org/obo/UPa_UPC00475 UPA LOOM
http://uri.neuinfo.org/nif/nifstd/nifext_5191 NIFSTD LOOM
https://go.drugbank.com/drugs/DB02097 MDM LOOM
http://purl.obolibrary.org/obo/dinto_DB02097 DINTO LOOM
http://purl.jp/bio/10/gmo/GMO_001422 GMO LOOM
http://purl.obolibrary.org/obo/MESH_D003562 BERO LOOM
http://purl.bioontology.org/ontology/CSP/2516-7735 CRISP LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/75265007 SNOMEDCT LOOM
http://id.nlm.nih.gov/mesh/D003562 MDM LOOM
http://stirdf.jst.go.jp/id/200907033371233283 IOBC LOOM
http://purl.bioontology.org/ontology/LNC/MTHU051175 LOINC LOOM
http://purl.bioontology.org/ontology/MESH/D003562 MESH LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#3566 OCHV LOOM
http://purl.bioontology.org/ontology/SNMI/F-65610 SNMI LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0010715 OCHV LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D13.570.800.286 RH-MESH LOOM
http://purl.obolibrary.org/obo/CHEBI_17562 DRON LOOM
http://purl.obolibrary.org/obo/CHEBI_17562 PDRO LOOM
http://purl.obolibrary.org/obo/CHEBI_17562 BIPON LOOM
http://purl.obolibrary.org/obo/CHEBI_17562 GO-PLUS LOOM
http://purl.obolibrary.org/obo/CHEBI_17562 BERO LOOM
http://purl.obolibrary.org/obo/CHEBI_17562 DDSS LOOM
http://purl.obolibrary.org/obo/CHEBI_17562 BIOMODELS LOOM
http://purl.obolibrary.org/obo/CHEBI_17562 CIDO LOOM
http://purl.obolibrary.org/obo/CHEBI_17562 CHEBI LOOM
http://purl.obolibrary.org/obo/CHEBI_17562 HINO LOOM
http://purl.obolibrary.org/obo/CHEBI_17562 MCO LOOM
http://purl.bioontology.org/ontology/LNC/LP201693-1 LOINC LOOM