Experimental Factor Ontology

Last uploaded: April 18, 2019
Preferred Name

suprachiasmatic nucleus

Synonyms

Entire suprachiasmatic nucleus

suprachiasmatic nucleus of hypothalamus

suprachiasmatic nucleus (Spiegel-Zwieg)

SCh

SCN

nucleus suprachiasmaticus

nucleus suprachiasmaticus hypothalami

Definitions

The suprachiasmatic nucleus, or nuclei, (SCN), a tiny region on the brain's midline in a shallow impression of the optic chiasm, is responsible for controlling endogenous circadian rhythms. The neuronal and hormonal activities it generates regulate many different body functions over a 24-hour period. The SCN, pine cone shaped and the size of a grain of rice, interacts with many other regions of the brain. It contains several cell types and several different peptides and neurotransmitters. [WP,unvetted]. This class was created automatically from a combination of ontologies * An ovoid densely packed collection of small cells of the anterior hypothalamus lying close to the midline in a shallow impression of the optic chiasm. (MSH) * small group of nerve cell bodies in the supraoptic region of the hypothalamus, just above the optic chiasm; influences rhythmic aspects of hypothalamic functions in many vertebrate species. (CSP)

ID

http://purl.obolibrary.org/obo/UBERON_0002034

comment

This class was created automatically from a combination of ontologies

database_cross_reference

BAMS:SCh

ABA:SCH

EFO:0002475

ZFA:0000441

DHBA:10480

EV:0100228

BAMS:SCH

NIF_GrossAnatomy:birnlex_1325

DMBA:15660

XAO:0004072

UMLS:C1289559

CALOHA:TS-0992

HBA:12908

GAID:645

NCIt:C74537

Wikipedia:Suprachiasmatic_nucleus

MESH:A08.186.211.730.385.357.342.625

UMLS:C0038866

BTO:0001822

TAO:0000441

http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=384

VHOG:0000036

EMAPA:35841

BM:Die-Hy-SCN

MBA:286

http://upload.wikimedia.org/wikipedia/commons/thumb/8/8c/HypothalamicNuclei.PNG/200px-HypothalamicNuclei.PNG

MA:0000843

NCIT:C74537

http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG

SNOMEDCT:369132004

MSH:D013493

FMA:67883

http://linkedlifedata.com/resource/umls/id/C1289559

http://linkedlifedata.com/resource/umls/id/C0038866

http://www.snomedbrowser.com/Codes/Details/369132004

http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=384

http://uri.neuinfo.org/nif/nifstd/birnlex_1325

http://en.wikipedia.org/wiki/Suprachiasmatic_nucleus

definition

The suprachiasmatic nucleus, or nuclei, (SCN), a tiny region on the brain's midline in a shallow impression of the optic chiasm, is responsible for controlling endogenous circadian rhythms. The neuronal and hormonal activities it generates regulate many different body functions over a 24-hour period. The SCN, pine cone shaped and the size of a grain of rice, interacts with many other regions of the brain. It contains several cell types and several different peptides and neurotransmitters. [WP,unvetted].

* An ovoid densely packed collection of small cells of the anterior hypothalamus lying close to the midline in a shallow impression of the optic chiasm. (MSH) * small group of nerve cell bodies in the supraoptic region of the hypothalamus, just above the optic chiasm; influences rhythmic aspects of hypothalamic functions in many vertebrate species. (CSP)

depicted_by

http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG

has_broad_synonym

SCh

SCN

has_exact_synonym

Entire suprachiasmatic nucleus

suprachiasmatic nucleus of hypothalamus

SCN

nucleus suprachiasmaticus

has_obo_namespace

uberon

has_related_synonym

suprachiasmatic nucleus (Spiegel-Zwieg)

SCN

nucleus suprachiasmaticus

nucleus suprachiasmaticus hypothalami

homologous_in

http://purl.obolibrary.org/obo/NCBITaxon_7742

id

UBERON:0002034

in_subset

http://purl.obolibrary.org/obo/uberon#efo_slim

http://purl.obolibrary.org/obo/uberon#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon#uberon_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

label

suprachiasmatic nucleus

notation

UBERON:0002034

part_of

http://purl.obolibrary.org/obo/UBERON_0001898

http://purl.obolibrary.org/obo/UBERON_0001928

prefLabel

suprachiasmatic nucleus

treeView

http://purl.obolibrary.org/obo/UBERON_0001898

http://purl.obolibrary.org/obo/UBERON_0001928

spatially_disjoint_from

http://purl.obolibrary.org/obo/UBERON_0002689

http://purl.obolibrary.org/obo/UBERON_0002625

http://purl.obolibrary.org/obo/UBERON_0001934

http://purl.obolibrary.org/obo/UBERON_0002690

http://purl.obolibrary.org/obo/UBERON_0002219

http://purl.obolibrary.org/obo/UBERON_0007626

subClassOf

http://www.ebi.ac.uk/efo/EFO_0000787

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Delete Mapping To Ontology Source
http://radlex.org/RID/RID20586 RADLEX LOOM
http://uri.interlex.org/paxinos/uris/rat/labels/955 NIFSTD LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 UPHENO LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000441 ZFA LOOM
http://www.radlex.org/RID/#RID20586 RADLEX LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Suprachiasmatic_Nucleus APAONTO LOOM
http://purl.obolibrary.org/obo/BTO_0001822 BTO LOOM
http://purl.obolibrary.org/obo/BTO_0001822 DTO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Suprachiasmatic_Nucleus SYN LOOM
http://www.projecthalo.com/aura#Suprachiasmatic-Nucleus AURA LOOM
http://purl.org/obo/owlapi/fma#FMA_67883 BIOMODELS LOOM
http://purl.bioontology.org/ontology/MESH/D013493 MESH LOOM
http://mouse.brain-map.org/atlas/index.html#SCH ABA-AMB LOOM
http://purl.obolibrary.org/obo/XAO_0004072 XAO LOOM
http://purl.obolibrary.org/obo/XAO_0004072 XAO LOOM
http://purl.bioontology.org/ontology/SNMI/T-A4713 SNMI LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_1325 BIRNLEX LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_1325 NIFSTD LOOM
http://purl.bioontology.org/ontology/CSP/0478-2536 CRISP LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#A08.186.211.730.317.357.342.625 RH-MESH LOOM
http://purl.obolibrary.org/obo/UBERON_0002034 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0002034 UBERON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002034 CCONT LOOM
http://purl.obolibrary.org/obo/UBERON_0002034 CCONT SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002034 NBO LOOM
http://purl.obolibrary.org/obo/UBERON_0002034 NBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002034 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0002034 UBERON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002034 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0002034 UPHENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002034 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0002034 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002034 OBA LOOM
http://purl.obolibrary.org/obo/UBERON_0002034 OBA SAME_URI
http://purl.org/sig/ont/fma/fma67883 FMA LOOM
http://purl.obolibrary.org/obo/TAO_0000441 TAO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C74537 NCIT LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C74537 NCIT LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C74537 NCIT LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C74537 NCIT LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C74537 NCIT LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C74537 NCIT LOOM
http://purl.obolibrary.org/obo/MA_0000843 MA LOOM
http://purl.obolibrary.org/obo/EMAPA_35841 EMAPA LOOM
http://purl.obolibrary.org/obo/EMAPA_35841 EMAPA LOOM
http://purl.jp/bio/4/id/200906019454527975 IOBC LOOM
http://purl.jp/bio/4/id/200906019454527975 IOBC LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D013493 RH-MESH LOOM
http://api.brain-map.org/api/v2/data/Structure/286 NIFSTD LOOM
http://localhost/plosthes.2017-1#5888 PLOSTHES LOOM