Experimental Factor Ontology

Last uploaded: April 15, 2024
Preferred Name

cochlea

Synonyms

cochlear part of bony labyrinth

lagena

cochlear organ

cochlear duct

cochleae

lagenas

Definitions

The spiral-shaped bony canal in the inner ear containing the hair cells that transduce sound. Its core component is the Organ of Corti, the sensory organ of hearing, which is distributed along the partition separating fluid chambers in the coiled tapered tube of the cochlea. [WP,modified].

ID

http://purl.obolibrary.org/obo/UBERON_0001844

database_cross_reference

BIRNLEX:1190

VHOG:0000691

AAO:0000253

NCIT:C12395

UMLS:C1278895

XAO:0000197

ZFA:0000374

TAO:0000374

EFO:0000357

MESH:D003051

MAT:0000144

Wikipedia:Cochlea

BTO:0000267

CALOHA:TS-0151

UMLS:C0009195

EMAPA:17597

MIAA:0000144

NIFSTD_RETIRED:birnlex_883

SCTID:181187008

EV:0100363

FMA:60201

GAID:724

MA:0000240

definition

The spiral-shaped bony canal in the inner ear containing the hair cells that transduce sound. Its core component is the Organ of Corti, the sensory organ of hearing, which is distributed along the partition separating fluid chambers in the coiled tapered tube of the cochlea. [WP,modified].

depiction

http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png

http://upload.wikimedia.org/wikipedia/commons/c/cb/Cochlea-crosssection.svg

external_definition

A spiral-shaped cavity in the petrous portion of the temporal bone of the inner ear, containing the nerve endings essential for hearing and forming one of the divisions of the labyrinth. [TFD][VHOG]

external_ontology_notes

sources vary in connection to bony labyrinth

has_exact_synonym

cochlear part of bony labyrinth

lagena

has_obo_namespace

uberon

has_related_synonym

cochlear organ

cochlear duct

cochleae

lagenas

has_relational_adjective

cochlear

homology_notes

Because achieving high sensitivity is generally advantageous for auditory organs, it is not surprising that evidence for cochlear amplification is also seen in nonmammals. Spontaneous otoacoustic emissions (SOAEs) are narrow-band sound signals emitted from the inner ear, and it is generally assumed that their energy derives from the hair-cell molecular motors underlying cochlear amplification. However, all terrestrial vertebrates studied so far (including amphibians) show very similar SOAEs. The most parsimonious explanation for the universality of this phenomena is that some kind of amplifying mechanism is at least as old as land vertebrates themselves.[well established][VHOG]

id

UBERON:0001844

in_subset

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

cochlea

notation

UBERON:0001844

part_of

http://purl.obolibrary.org/obo/UBERON_0001839

prefLabel

cochlea

taxon_notes

The association with 'lagena' in frog and fish comes from HOG, although HOG is inconsistent here, associating lagena with XAO cochlea and ZFA cochlear duct. NBK53175 says: 'In contrast, the ventrally located auditory chambers have undergone more extensive evolutionary modifications. The saccule and lagena are prominent auditory organs in fish but the saccule has a vestibular role in mammals and birds, and the lagena is absent in mammals. The primary au- ditory organ in mammals and birds is the cochlea, which has no known counterpart in amphibians and fish (Riley and Phillips, 2003)'

the cochlea is coiled in most mammals, monotremes being the exceptions.

treeView

http://purl.obolibrary.org/obo/UBERON_0001839

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000061

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0001844 UBERON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001844 OBA SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001844 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001844 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001844 MONDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001844 NPOKB SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001844 BERO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001844 HHEAR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001844 OBI_IEE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001844 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001844 MAXO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001844 FNS-H SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001844 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0001844 OBA LOOM
http://purl.obolibrary.org/obo/UBERON_0001844 CL LOOM
http://purl.obolibrary.org/obo/UBERON_0001844 GO-PLUS LOOM
http://purl.org/obo/owlapi/fma#FMA_60201 BIOMODELS LOOM
http://purl.obolibrary.org/obo/OMIT_0004361 OMIT LOOM
http://localhost/plosthes.2017-1#4553 PLOSTHES LOOM
http://www.projecthalo.com/aura#Cochlea AURA LOOM
http://purl.bioontology.org/ontology/MESH/D003051 MESH LOOM
http://purl.jp/bio/4/id/200906098105356567 IOBC LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12395 NCIT LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#A09.246.631.246 RH-MESH LOOM
http://purl.obolibrary.org/obo/BTO_0000267 BTO LOOM
http://purl.obolibrary.org/obo/VHOG_0000691 VHOG LOOM
http://purl.obolibrary.org/obo/MA_0000240 MA LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D003051 RH-MESH LOOM
http://id.nlm.nih.gov/mesh/D003051 MDM LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0009195 OCHV LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_1190 NIFSTD LOOM
http://purl.org/sig/ont/fma/fma60201 FMA LOOM
http://purl.org/sig/ont/fma/fma60201 ROO LOOM
http://radlex.org/RID/RID10223 RADLEX LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_1190 BIRNLEX LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Cochlea SYN LOOM
http://purl.obolibrary.org/obo/EMAPA_17597 EMAPA LOOM
http://purl.bioontology.org/ontology/RCD/7N183 RCD LOOM
http://purl.obolibrary.org/obo/NCIT_C12395 BERO LOOM
http://purl.bioontology.org/ontology/CSP/0975-1890 CRISP LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_883 BIRNLEX LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Cochlea APAONTO LOOM
http://purl.obolibrary.org/obo/MAT_0000144 MAT LOOM
http://purl.obolibrary.org/obo/UBERON_0001844 NPOKB LOOM
http://purl.obolibrary.org/obo/UBERON_0001844 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0001844 OBI_IEE LOOM
http://purl.obolibrary.org/obo/UBERON_0001844 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0001844 MAXO LOOM
http://purl.obolibrary.org/obo/UBERON_0001844 FNS-H LOOM