Experimental Factor Ontology

Last uploaded: April 15, 2024
Preferred Name

retina

Synonyms

retina of camera-type eye

inner layer of eyeball

tunica interna of eyeball

Netzhaut

retinas

Definitions

Currently this class encompasses only verteberate AOs but could in theory also include cephalopod - we may want to make a more specific class for vertebrate retina. note that this class excludes ommatidial retinas, as the retina must be part of an eyeball. Use the parent class photoreceptor array / light-sensitive tissue for arthropods The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.

ID

http://purl.obolibrary.org/obo/UBERON_0000966

comment

Currently this class encompasses only verteberate AOs but could in theory also include cephalopod - we may want to make a more specific class for vertebrate retina. note that this class excludes ommatidial retinas, as the retina must be part of an eyeball. Use the parent class photoreceptor array / light-sensitive tissue for arthropods

database_cross_reference

BTO:0001175

SCTID:181171005

XAO:0000009

BIRNLEX:1153

neuronames:1862

UMLS:C1278894

ZFA:0000152

EMAPA:17168

NCIT:C12343

MAT:0000142

Wikipedia:Retina

VHOG:0000229

MESH:D012160

EHDAA2:0001627

AAO:0010352

TAO:0000152

EFO:0000832

UMLS:C0035298

MBA:304325711

NIFSTD_RETIRED:birnlex_1156

CALOHA:TS-0865

MIAA:0000142

BAMS:R

EHDAA:4757

EV:0100348

FMA:58301

GAID:755

MA:0000276

definition

The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.

depiction

http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png

external_definition

The portion of the eye developing from the optic primordium and including the neural retina and the retinal pigment layer. Kimmel et al, 1995.[TAO]

has_exact_synonym

retina of camera-type eye

inner layer of eyeball

tunica interna of eyeball

has_obo_namespace

uberon

has_related_synonym

Netzhaut

retinas

has_relational_adjective

retinal

homology_notes

The eye of the adult lamprey is remarkably similar to our own, and it possesses numerous features (including the expression of opsin genes) that are very similar to those of the eyes of jawed vertebrates. The lamprey's camera-like eye has a lens, an iris and extra-ocular muscles (five of them, unlike the eyes of jawed vertebrates, which have six), although it lacks intra-ocular muscles. Its retina also has a structure very similar to that of the retinas of other vertebrates, with three nuclear layers comprised of the cell bodies of photoreceptors and bipolar, horizontal, amacrine and ganglion cells. The southern hemisphere lamprey, Geotria australis, possesses five morphological classes of retinal photoreceptor and five classes of opsin, each of which is closely related to the opsins of jawed vertebrates. Given these similarities, we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya.[well established][VHOG]

id

UBERON:0000966

in_subset

http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

retina

never_in_taxon

http://purl.obolibrary.org/obo/NCBITaxon_6656

notation

UBERON:0000966

part_of

http://purl.obolibrary.org/obo/UBERON_0000970

http://purl.obolibrary.org/obo/UBERON_0001016

http://purl.obolibrary.org/obo/UBERON_0019207

prefLabel

retina

RO_0002175

http://purl.obolibrary.org/obo/NCBITaxon_9606

treeView

http://purl.obolibrary.org/obo/UBERON_0000970

http://purl.obolibrary.org/obo/UBERON_0001016

http://purl.obolibrary.org/obo/UBERON_0019207

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000061

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http://purl.obolibrary.org/obo/UBERON_0000966 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 NEIO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 HOIP SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 MONDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 UBERON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 DOID SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 PATO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 OBA SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 NPOKB SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 OAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 RBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 CLO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 OHPI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 FOVT SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 OCMR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 CHEAR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 OBI_BCGO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 XPO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 PCL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 NIFDYS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 BERO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 NBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 HHEAR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 TXPO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 UPHENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 KTAO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 MAXO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 CCF SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 ENVO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 FNS-H SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 AISM SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 NMDCO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000966 CL LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 NEIO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 HOIP LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 GO-PLUS LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 DOID LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 PATO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 OBA LOOM
http://www.semanticweb.org/ontologies/2010/10/BPO.owl#retina BHO LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Retina APANEUROCLUSTER LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Retina APAONTO LOOM
http://purl.obolibrary.org/obo/MA_0000276 MA LOOM
http://purl.obolibrary.org/obo/VHOG_0000229 VHOG LOOM
http://purl.bioontology.org/ontology/CSP/1111-4382 CRISP LOOM
http://purl.obolibrary.org/obo/NCIT_C12343 BERO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 NPOKB LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 OAE LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 RBO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 CLO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 OHPI LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 FOVT LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 OCMR LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 CHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 OBI_BCGO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 XPO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 PCL LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 NIFDYS LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 NBO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 TXPO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 KTAO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 MAXO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 CCF LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 ENVO LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 FNS-H LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 AISM LOOM
http://purl.obolibrary.org/obo/UBERON_0000966 NMDCO LOOM
http://purl.obolibrary.org/obo/ZFA_0000152 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0000152 UPHENO LOOM
http://purl.obolibrary.org/obo/ZFA_0000152 ZP LOOM
http://purl.obolibrary.org/obo/BTO_0001175 DTO LOOM
http://purl.obolibrary.org/obo/BTO_0001175 BTO LOOM
http://api.brain-map.org/api/v2/data/Structure/304325711 NPOKB LOOM
http://api.brain-map.org/api/v2/data/Structure/304325711 NIFSTD LOOM
http://www.projecthalo.com/aura#Retina AURA LOOM
http://purl.obolibrary.org/obo/MAT_0000142 MAT LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_1153 NIFSTD LOOM
http://purl.obolibrary.org/obo/EMAPA_17168 EMAPA LOOM
http://purl.bioontology.org/ontology/RCD/x03jL RCD LOOM
http://radlex.org/RID/RID9651 RADLEX LOOM
http://www.co-ode.org/ontologies/galen#Retina GALEN LOOM
http://purl.obolibrary.org/obo/EHDA_4758 EHDA LOOM
http://purl.obolibrary.org/obo/EHDA_6793 EHDA LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12343 NCIT LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#A09.371.729 RH-MESH LOOM
http://purl.org/sig/ont/fma/fma58301 FMA LOOM
http://purl.org/sig/ont/fma/fma58301 CCF LOOM
http://purl.org/sig/ont/fma/fma58301 ROO LOOM
http://purl.obolibrary.org/obo/EHDA_7831 EHDA LOOM
http://purl.obolibrary.org/obo/FBbt_00004200 FB-BT LOOM
http://purl.obolibrary.org/obo/EHDA_9075 EHDA LOOM
http://purl.obolibrary.org/obo/EHDA_10233 EHDA LOOM
urn:agi-folder:retina BPT LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#41375 OCHV LOOM
http://purl.obolibrary.org/obo/EHDAA2_0001627 EHDAA2 LOOM
http://localhost/plosthes.2017-1#9474 PLOSTHES LOOM
https://github.com/sap218/ocimido/blob/master/ontology/ocimido.owl#OCIMIDO_00156 OCIMIDO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0593762 OCHV LOOM
http://purl.obolibrary.org/obo/OMIT_0013080 OMIT LOOM
http://purl.bioontology.org/ontology/RXNORM/153101 RXNORM LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D012160 RH-MESH LOOM
http://purl.obolibrary.org/obo/TAO_0000152 TAO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Retina SYN LOOM
http://neuromorpho.org/ontologies/vertebrateH.owl#NMOBr_249 NMOBR LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0035298 OCHV LOOM
http://purl.org/obo/owlapi/fma#FMA_58301 BIOMODELS LOOM
http://purl.obolibrary.org/obo/SPD_0000564 SPD LOOM
http://purl.obolibrary.org/obo/MFO_0003600 MFO LOOM
http://www.semanticweb.org/ontologies/2012/11/abnormalities.owl#phenodb:0334 IFAR LOOM
http://purl.bioontology.org/ontology/RCD/7N162 RCD LOOM
http://purl.jp/bio/4/id/200906090667307339 IOBC LOOM
http://purl.bioontology.org/ontology/MESH/D012160 MESH LOOM
http://doe-generated-ontology.com/OntoAD#C0035298 ONTOAD LOOM
http://purl.bioontology.org/ontology/LNC/MTHU015065 LOINC LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#10791 OCHV LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_1156 BIRNLEX LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_1153 BIRNLEX LOOM
http://purl.obolibrary.org/obo/EHDA_5723 EHDA LOOM
http://purl.bioontology.org/ontology/LNC/LP30548-9 LOINC LOOM
http://purl.obolibrary.org/obo/EHDAA_4757 EHDAA LOOM
http://purl.obolibrary.org/obo/XAO_0000009 XPO LOOM
http://purl.obolibrary.org/obo/XAO_0000009 XAO LOOM