Experimental Factor Ontology

Last uploaded: October 15, 2019
Preferred Name

brain

Synonyms

suprasegmental structures

encephalon

suprasegmental levels of nervous system

synganglion

the brain

Definitions

The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP].

ID

http://purl.obolibrary.org/obo/UBERON_0000955

contributor

https://github.com/cmungall

database_cross_reference

BTO:0000142

http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=21

BILA:0000135

ABA:Brain

GAID:571

FMA:50801

OpenCyc:Mx4rvVjT65wpEbGdrcN5Y29ycA

EFO:0000302

BAMS:Br

EMAPA:16894

EHDAA:6485

MAT:0000098

PBA:3999

MA:0000168

EHDAA:2641

EV:0100164

MBA:997

MIAA:0000098

MESH:D001921

TAO:0000008

HBA:4005

UMLS:C1269537

galen:Brain

UMLS:C0006104

CALOHA:TS-0095

BIRNLEX:796

XAO:0000010

EHDAA2:0000183

BAMS:Brain

MBA:8

VHOG:0000157

NCIT:C12439

ZFA:0000008

AAO:0010478

FBbt:00005095

DHBA:10155

http://linkedlifedata.com/resource/umls/id/C0006104

http://linkedlifedata.com/resource/umls/id/C1269537

http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=21

http://en.wikipedia.org/wiki/Brain

http://www.snomedbrowser.com/Codes/Details/258335003

definition

The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP].

editor note

requires review for applicability to invertebrate structures, e.g. synganglion

external_definition

Part of the central nervous system situated within the cranium and composed of both nerve cell bodies and nerve fibers.[AAO]

The part of the central nervous system contained within the cranium, comprising the forebrain, midbrain, hindbrain, and metencephalon. It is derived from the anterior part of the embryonic neural tube (or the encephalon). Does not include retina. (CUMBO)

Cavitated compound organ which is comprised of gray and white matter and surrounds the cerebral ventricular system.[TAO]

has_obo_namespace

uberon

has_related_synonym

suprasegmental structures

encephalon

suprasegmental levels of nervous system

synganglion

the brain

homology_notes

(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...) (reference 1); The neural tube is destined to differentiate into the brain and spinal cord (the central nervous system) (reference 2).[well established][VHOG]

id

UBERON:0000955

in_subset

http://purl.obolibrary.org/obo/uberon/core#major_organ

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#cumbo

label

brain

notation

UBERON:0000955

part_of

http://purl.obolibrary.org/obo/UBERON_0000467

http://purl.obolibrary.org/obo/UBERON_0001017

prefLabel

brain

treeView

http://purl.obolibrary.org/obo/UBERON_0000467

http://purl.obolibrary.org/obo/UBERON_0001017

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000061

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Delete Mapping To Ontology Source
http://radlex.org/RID/RID6434 RADLEX LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Brain APANEUROCLUSTER LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Brain APAONTO LOOM
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http://www.projecthalo.com/aura#Brain AURA LOOM
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http://www.semanticweb.org/ontologies/2009/9/Ontology1255357986125.owl#Brain BRCT LOOM
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http://sbmi.uth.tmc.edu/ontology/ochv#C0006104 OCHV LOOM
http://purl.obolibrary.org/obo/EHDAA_6485 EHDAA LOOM
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http://scai.fraunhofer.de/MSOntology#Brain MSO LOOM
http://www.co-ode.org/ontologies/galen#Brain GALEN LOOM
http://www.bioontology.org/pma.owl#PMA_732 PMA LOOM
urn:absolute:RadiationOncologyStructuresOntology#Brain ROS LOOM
http://id.loc.gov/authorities/subjects/sh85016319 FAST-TOPICAL LOOM
http://purl.obolibrary.org/obo/EHDA_9870 EHDA LOOM
http://www.case.edu/EpSO.owl#Brain EPSO LOOM
http://purl.obolibrary.org/obo/PLANA_0007537 PLANP LOOM
http://purl.obolibrary.org/obo/PLANA_0007537 PLANA LOOM
http://purl.bioontology.org/ontology/RCD/X7A8X RCD LOOM
http://purl.obolibrary.org/obo/EHDA_5427 EHDA LOOM
http://purl.obolibrary.org/obo/EHDA_8747 EHDA LOOM
http://purl.obolibrary.org/obo/EHDA_8688 EHDA LOOM
http://purl.jp/bio/11/meo/MEO_0000491 MEO LOOM
http://purl.obolibrary.org/obo/EHDA_3469 EHDA LOOM
http://purl.obolibrary.org/obo/TAO_0000008 TAO LOOM
http://purl.org/sig/ont/fma/fma50801 FMA LOOM
http://purl.org/sig/ont/fma/fma50801 ROO LOOM
http://purl.org/sig/ont/fma/fma50801 RB LOOM
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http://www.owl-ontologies.com/OntoFood.owl#Brain DMTO LOOM
http://www.semanticweb.org/rjyy/ontologies/2015/5/ESSO#Brain ESSO LOOM
http://doe-generated-ontology.com/OntoAD#C0006104 ONTOAD LOOM
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http://purl.jp/bio/4/id/200906076001543418 IOBC LOOM
https://bioportal.bioontology.org/ontologies/ICD-O-3-T/C71 ICD-O-3-T LOOM
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http://www.icn.ch/icnp#Brain ICNP LOOM
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