EDAM - The data analysis and management ontology - RNA-Seq - Classes

Last uploaded: February 26, 2021

Id	http://edamontology.org/topic_3170 http://edamontology.org/topic_3170
Preferred Name	RNA-Seq
Definitions	This includes small RNA profiling (small RNA-Seq), for example to find novel small RNAs, characterize mutations and analyze expression of small RNAs. A topic concerning high-throughput sequencing of cDNA to measure the RNA content (transcriptome) of a sample, for example, to investigate how different alleles of a gene are expressed, detect post-transcriptional mutations or identify gene fusions.
Synonyms	MicroRNA sequencing miRNA-seq Whole transcriptome shotgun sequencing Small RNA-Seq RNA sequencing Transcriptome profiling Small RNA sequencing RNA-Seq analysis Small-Seq WTSS
Type	http://www.w3.org/2002/07/owl#Class

label	RNA-Seq
comment	This includes small RNA profiling (small RNA-Seq), for example to find novel small RNAs, characterize mutations and analyze expression of small RNAs.
prefLabel	RNA-Seq
inSubset	http://edamontology.org/bio http://edamontology.org/topics
hasNarrowSynonym	MicroRNA sequencing miRNA-seq
prefixIRI	topic_3170
seeAlso	https://en.wikipedia.org/wiki/RNA-Seq https://en.wikipedia.org/wiki/Small_RNA_sequencing
subClassOf	http://edamontology.org/topic_3168
hasDefinition	A topic concerning high-throughput sequencing of cDNA to measure the RNA content (transcriptome) of a sample, for example, to investigate how different alleles of a gene are expressed, detect post-transcriptional mutations or identify gene fusions.
type	http://www.w3.org/2002/07/owl#Class
hasHumanReadableId	RNA-Seq
hasExactSynonym	Whole transcriptome shotgun sequencing Small RNA-Seq RNA sequencing Transcriptome profiling Small RNA sequencing RNA-Seq analysis Small-Seq WTSS See more See less
Created in	1.1

Delete	Subject	Author	Type	Created
No notes to display