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EDAM - The ontology of data analysis and management
Last uploaded:
November 12, 2025
| Id | http://edamontology.org/operation_3216
http://edamontology.org/operation_3216
|
|---|---|
| Preferred Name | Scaffolding |
| Definitions |
Link together a non-contiguous series of genomic sequences into a scaffold, consisting of sequences separated by gaps of known length. The sequences that are linked are typically typically contigs; contiguous sequences corresponding to read overlaps.
Scaffold may be positioned along a chromosome physical map to create a "golden path".
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| Synonyms |
Scaffold generation
Scaffold construction
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| Type | http://www.w3.org/2002/07/owl#Class |
All Properties
| prefLabel | Scaffolding
|
|---|---|
| label | Scaffolding
|
| comment | Scaffold may be positioned along a chromosome physical map to create a "golden path".
|
| hasExactSynonym |
Scaffold generation
Scaffold construction
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| type | |
| hasDefinition | Link together a non-contiguous series of genomic sequences into a scaffold, consisting of sequences separated by gaps of known length. The sequences that are linked are typically typically contigs; contiguous sequences corresponding to read overlaps.
|
| inSubset | |
| prefixIRI | operation_3216
|
| Created in | 1.1
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| subClassOf |
| Delete | Subject | Author | Type | Created |
|---|---|---|---|---|
| No notes to display |