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EDAM - The ontology of data analysis and management
Last uploaded:
November 12, 2025
| Id | http://edamontology.org/data_2012
http://edamontology.org/data_2012
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|---|---|
| Preferred Name | Sequence coordinates |
| Definitions |
A position in a map (for example a genetic map), either a single position (point) or a region / interval.
This includes positions in genomes based on a reference sequence. A position may be specified for any mappable object, i.e. anything that may have positional information such as a physical position in a chromosome. Data might include sequence region name, strand, coordinate system name, assembly name, start position and end position.
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| Synonyms |
Map position
Locus
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| Type | http://www.w3.org/2002/07/owl#Class |
All Properties
| prefLabel | Sequence coordinates
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|---|---|
| label | Sequence coordinates
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| comment | This includes positions in genomes based on a reference sequence. A position may be specified for any mappable object, i.e. anything that may have positional information such as a physical position in a chromosome. Data might include sequence region name, strand, coordinate system name, assembly name, start position and end position.
|
| hasExactSynonym |
Map position
Locus
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| type | |
| hasDefinition | A position in a map (for example a genetic map), either a single position (point) or a region / interval.
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| inSubset | |
| prefixIRI | data_2012
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| hasDbXref |
Moby:Position
Moby:GCP_MapPosition
Moby:GCP_MapPoint
Moby:HitPosition
PDBML:_atom_site.id
Moby:GenePosition
Moby:GCP_MapInterval
Moby:MapPosition
Moby:Locus
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| Created in | June 12, 2026
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| subClassOf |
| Delete | Subject | Author | Type | Created |
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| No notes to display |