The Ecosystem Ontology

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Preferred Name	Entity
Definitions	An entity is an object (e.g., a tree, a community, an ecological process). Entities constitute the foci of observations, i.e., every observation is of exactly one entity. Confirm: structure of Entity (with subclass of 'continuant' and 'occurrent' from BFO) or 'continuant' and 'occurrent > process' from ENVO)?
ID	http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#Entity
comment	An entity is an object (e.g., a tree, a community, an ecological process). Entities constitute the foci of observations, i.e., every observation is of exactly one entity. Confirm: structure of Entity (with subclass of 'continuant' and 'occurrent' from BFO) or 'continuant' and 'occurrent > process' from ENVO)?
preferred label	Entity
prefixIRI	oboe-core:Entity
rdfs:label	Entity
disjointWith	http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#Standard http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#Protocol http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#Measurement http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#ObservationCollection http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#MeasurementType http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#Observation
subClassOf	http://www.w3.org/2002/07/owl#Thing

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Mapping To	Ontology	Source
http://www.semanticweb.org/alberto.traverso/ontologies/2017/1/RADIOMICS-ontology#OWLClass_010127	Radiomics Ontology	LOOM
http://semanticscience.org/resource/SIO_000000	Gene Expression Ontology	LOOM
http://semanticscience.org/resource/SIO_000000	Regulation of Gene Expression Ontolology	LOOM
http://semanticscience.org/resource/SIO_000000	Orthology Ontology	LOOM
http://semanticscience.org/resource/SIO_000000	Biological Observation Matrix Ontology	LOOM
http://semanticscience.org/resource/SIO_000000	Interlinking Ontology for Biological Concepts	LOOM
http://semanticscience.org/resource/SIO_000000	Semanticscience Integrated Ontology	LOOM
http://www.semanticweb.org/ontologies/2009/3/ontoDPN.owl#Entitee	Early Pregnancy Ontology	LOOM
http://swrl.stanford.edu/ontologies/built-ins/3.4/swrlxml.owl#Entity	Situation-Based Access Control Ontology	LOOM
http://swrl.stanford.edu/ontologies/3.3/swrla.owl#Entity	Situation-Based Access Control Ontology	LOOM
http://swrl.stanford.edu/ontologies/3.3/swrla.owl#Entity	Breast Cancer Grading Ontology	LOOM
http://swrl.stanford.edu/ontologies/3.3/swrla.owl#Entity	Ontology for Genetic Disease Investigations	LOOM
http://swrl.stanford.edu/ontologies/3.3/swrla.owl#Entity	OntoFood	LOOM
http://swrl.stanford.edu/ontologies/3.3/swrla.owl#Entity	Biodiversity Ontology	LOOM
http://swrl.stanford.edu/ontologies/3.3/swrla.owl#Entity	Cerebrotendinous Xanthomatosis Ontology	LOOM
http://doe-generated-ontology.com/OntoAD#Entity	Bilingual Ontology of Alzheimer's Disease and Related Diseases	LOOM
http://www.onto-med.de/ontologies/gfo.owl#Entity	General Formal Ontology	LOOM
http://www.onto-med.de/ontologies/gfo.owl#Entity	General Formal Ontology for Biology	LOOM
http://purl.org/net/OCRe/OCRe.owl#OCRE400032	Ontology of Clinical Research	LOOM
http://www.w3.org/ns/prov#Entity	Children's Health Exposure Analysis Resource	LOOM
http://www.w3.org/ns/prov#Entity	AdaLab-meta ontology	LOOM
http://www.w3.org/ns/prov#Entity	PGxO	LOOM
http://www.w3.org/ns/prov#Entity	NIDM-Results	LOOM
http://www.w3.org/ns/prov#Entity	GBOL	LOOM
http://www.w3.org/ns/prov#Entity	MIAPA Ontology	LOOM
http://www.w3.org/ns/prov#Entity	REPRODUCE-ME	LOOM
http://www.w3.org/ns/prov#Entity	Provenance Ontology	LOOM
http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Entity	Situation-Based Access Control Ontology	LOOM
http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Entity	Breast Cancer Grading Ontology	LOOM
http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl#Entity	Ontology for Genetic Disease Investigations	LOOM
http://chem2bio2rdf.org/chem2bio2rdf.owl#Entity	Systems Chemical Biology and Chemogenomics Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Influenza Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Human Physiology Simulation Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Cigarette Smoke Exposure Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	NGS ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Autism DSM-ADI-R ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Adverse Event Reporting Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Neomark Oral Cancer Ontology, version 4	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Computer-Based Patient Record Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Neural ElectroMagnetic Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Alzheimer's disease ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Clusters of Orthologous Groups (COG) Analysis Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Pre-eclampsia Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Electrocardiography Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Cancer Chemoprevention Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Sleep Domain Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Bone Dysplasia Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Chemical Information Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Host Pathogen Interactions Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Ontology for Parasite LifeCycle	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Ontology for Genetic Disease Investigations	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Skin Physiology Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Dengue Fever Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Cancer Research and Management ACGT Master Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Computational Neuroscience Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Ontology for Drug Discovery Investigations	LOOM
http://www.ifomis.org/bfo/1.1#Entity	Time Event Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	NanoParticle Ontology	LOOM
http://www.ifomis.org/bfo/1.1#Entity	SMART Protocols	LOOM
http://www.limics.fr/ontologies/menelastop#Entity	Menelas Project Top-Level Ontology	LOOM
http://purl.obolibrary.org/obo/ODGI.owl#Entity	Ontology for Genetic Disease Investigations	LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C51070	National Cancer Institute Thesaurus	LOOM
http://semanticscience.org/resource/Entity	Children's Health Exposure Analysis Resource	LOOM
http://www.icn.ch/icnp#Entity	International Classification for Nursing Practice	LOOM
http://purl.bioontology.org/ontology/HL7/C1551338	Health Level Seven Reference Implementation Model, Version 3	LOOM
http://bioontology.org/projects/ontologies/birnlex#Entity	Biomedical Informatics Research Network Project Lexicon	LOOM
http://purl.obolibrary.org/obo/TRAK_0000001	Taxonomy for Rehabilitation of Knee Conditions	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Genes and Genomes	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Host-Microbe Interactions	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Drug Neuropathy Adverse Events	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Influenza Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Bioinformatics Web Service Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Data Collection Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Pipeline Patterns Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Life Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	VIVO-Integrated Semantic Framework	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Cardiovascular Disease Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology for Biomedical Investigations	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Beta Cell Genomics Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Children's Health Exposure Analysis Resource	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology for Nutritional Studies	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Informed Consent Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Obstetric and Neonatal Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Population and Community Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	The Oral Health and Disease Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Visualized Emotion Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Genotype Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Emotion Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	The Data Use Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	AdaLab ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Adverse Event Reporting Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Information Artifact Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Brucellosis Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Genes and Genomes - Mouse	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	eNanoMapper	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ethnicity Ontoloy	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Plant Phenology Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Chinese Medicine for Rheumatism	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Diabetes Mellitus Diagnosis Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Non-coding RNA Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	FoodOn	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Interaction Network Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Core Data Mining Entities	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Medically Related Social Entities	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Precision Medicine and Investigation	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Adverse Events	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	AGRonomy Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Infectious Disease Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Cognitive Paradigm Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Plant Experimental Conditions Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Plant Experimental Assay Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Biological Collections Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Mental Functioning Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	MFO Mental Disease Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Chemical Information Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	VIVO Ontology for Researcher Discovery	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology for Biobanking	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Viral Disease Ontology Trunk	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Neurodegenerative Disease Data Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	The Drug Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Vaccine Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Evidence and Conclusion Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Cell Line Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology for Genetic Susceptibility Factor	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology for General Medical Science	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Vital Sign Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Knowledge Object Reference Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Role Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Apollo Structured Vocabulary	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Vaccination Informed Consent Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Geographical Entity Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Neuroscience Information Framework (NIF) Dysfunction Ontlogy	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	NMR-Controlled Vocabulary	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Eagle-I Research Resource Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	EuPath Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Basic Formal Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Drug Interaction and Evidence Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Human Interaction Network Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Cardiovascular Drug Adverse Events	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Epigenome Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Biological and Clinical Statistics	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Neuroscience Information Framework (NIF) Standard Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Common Anatomy Reference Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Time Event Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Kidney Tissue Atlas Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Environment Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology for Newborn Screening Follow-up and Translational Research	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Monarch Disease Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	GenEpiO	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Microbial Typing Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Diabetes Mellitus Treatment Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Organizational Structures of Trauma centers and Trauma systems	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	The Prescription of Drugs Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology of Vaccine Adverse Events	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Statistics Ontology	LOOM
http://purl.obolibrary.org/obo/BFO_0000001	Ontology for Genetic Interval	LOOM
http://purl.bioontology.org/ontology/STY/T071	Physician Data Query	LOOM
http://purl.bioontology.org/ontology/STY/T071	RxNORM	LOOM
http://purl.bioontology.org/ontology/STY/T071	MedlinePlus Health Topics	LOOM
http://purl.bioontology.org/ontology/STY/T071	Minimal Standard Terminology of Digestive Endoscopy, French	LOOM
http://purl.bioontology.org/ontology/STY/T071	Veterans Health Administration National Drug File	LOOM
http://purl.bioontology.org/ontology/STY/T071	International Classification of Primary Care	LOOM
http://purl.bioontology.org/ontology/STY/T071	Health Level Seven Reference Implementation Model, Version 3	LOOM
http://purl.bioontology.org/ontology/STY/T071	Read Codes, Clinical Terms Version 3 (CTV3)	LOOM
http://purl.bioontology.org/ontology/STY/T071	International Classification of Diseases, Version 10	LOOM
http://purl.bioontology.org/ontology/STY/T071	National Drug Data File	LOOM
http://purl.bioontology.org/ontology/STY/T071	International Classification of Diseases, Version 10 - Procedure Coding System	LOOM
http://purl.bioontology.org/ontology/STY/T071	Logical Observation Identifier Names and Codes	LOOM
http://purl.bioontology.org/ontology/STY/T071	Online Mendelian Inheritance in Man	LOOM
http://purl.bioontology.org/ontology/STY/T071	International Classification of Diseases, Version 10 - Clinical Modification	LOOM
http://purl.bioontology.org/ontology/STY/T071	SNOMED CT	LOOM
http://purl.bioontology.org/ontology/STY/T071	Semantic Types Ontology	LOOM
http://purl.bioontology.org/ontology/STY/T071	Medical Dictionary for Regulatory Activities	LOOM
http://purl.bioontology.org/ontology/STY/T071	Computer Retrieval of Information on Scientific Projects Thesaurus	LOOM
http://purl.bioontology.org/ontology/STY/T071	Current Procedural Terminology	LOOM
http://purl.bioontology.org/ontology/STY/T071	Anatomical Therapeutic Chemical Classification	LOOM
http://purl.bioontology.org/ontology/STY/T071	Radiation Oncology Ontology	LOOM
http://purl.bioontology.org/ontology/STY/T071	Systematized Nomenclature of Medicine, International Version	LOOM
http://purl.bioontology.org/ontology/STY/T071	Minimal Standard Terminology of Digestive Endoscopy	LOOM
http://purl.bioontology.org/ontology/STY/T071	National Drug File - Reference Terminology	LOOM
http://purl.bioontology.org/ontology/STY/T071	Master Drug Data Base Clinical Drugs	LOOM
http://purl.bioontology.org/ontology/STY/T071	World Health Organization (WHO) Adverse Reaction Terminology	LOOM
http://purl.bioontology.org/ontology/STY/T071	International Classification of Diseases, Version 9 - Clinical Modification	LOOM
http://purl.bioontology.org/ontology/STY/T071	Artificial Intelligence Rheumatology Consultant System Ontology	LOOM
http://purl.bioontology.org/ontology/STY/T071	Coding Symbols for a Thesaurus of Adverse Reaction Terms	LOOM
http://purl.bioontology.org/ontology/STY/T071	National Center for Biotechnology Information (NCBI) Organismal Classification	LOOM
http://purl.bioontology.org/ontology/STY/T071	Medical Subject Headings	LOOM
http://purl.bioontology.org/ontology/STY/T071	International Classification of Primary Care - 2 PLUS	LOOM
http://purl.bioontology.org/ontology/STY/T071	Master Drug Data Base Clinical Drugs	LOOM
http://purl.bioontology.org/ontology/STY/T071	Healthcare Common Procedure Coding System	LOOM
http://www.owl-ontologies.com/Ontology1435740495.owl#Entity	OntoFood	LOOM
http://purl.obolibrary.org/obo/bfo_Entity	Malaria Ontology	LOOM
http://purl.obolibrary.org/obo/bfo_Entity	Mosquito Insecticide Resistance	LOOM
http://purl.obolibrary.org/obo/bfo_Entity	Ontology for MicroRNA Target	LOOM
http://www.semanticweb.org/abed/ontologies/2015/2/untitled-ontology-346#Entity	MyOntoServiceFull_FallDetection	LOOM
http://www.projecthalo.com/aura#Entity	KB_Bio_101	LOOM
http://purl.obolibrary.org/obo/SIO_000000	Regulation of Transcription Ontology	LOOM
http://purl.org/net/p-plan#Entity	REPRODUCE-ME	LOOM
http://www.biopax.org/release/biopax-level3.owl#Entity	BioPAX Ontology of Biological Pathways	LOOM
http://www.biopax.org/release/biopax-level3.owl#Entity	Molecular Interaction Map	LOOM
http://www.biopax.org/release/biopax-level3.owl#Entity	Drug Interaction Knowledge Base Ontology	LOOM
http://ecoinformatics.org/oboe/oboe.1.0/oboe-core.owl#Entity	Santa Barbara Coastal Observation Ontology	LOOM
http://www.ontologydesignpatterns.org/ont/dul/DUL.owl#Entity	PGxO	LOOM
http://www.ifomis.org/bfo/1.0#Entity	Subcellular Anatomy Ontology	LOOM
http://www.semanticweb.org/ontologies/2010/3/Ontology1271664172453.owl#Entity	Protein-ligand interaction ontology	LOOM
http://www.semanticweb.org/schra/ontologies/2017/4/PRIME_NewOntology#Entity	PatientSafetyOntology	LOOM

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