Cell Culture Ontology

Last uploaded: July 23, 2014
Preferred Name

Synonyms

cortex of cerebral hemisphere

cortical plate (areas)

pallium of the brain

cortical plate (CTXpl)

cortex cerebri

brain cortex

cortex cerebralis

Definitions

The thin layer of gray matter on the surface of the cerebral hemisphere that develops from the telencephalon. It consists of the neocortex (6 layered cortex or isocortex), the hippocampal formation and the olfactory cortex.

ID

http://purl.obolibrary.org/obo/UBERON_0000956

curator note

We follow NIFSTD in defining cerebral cortex and including both neocortex and hippocampal formation (DG+hippocampus).

database_cross_reference

BAMS:Cerebral_cortex

neuronames:39

BIRNLEX:1494

MAT:0000108

PBA:128011354

EMAPA:17544

EHDAA2:0000234

SCTID:362880003

NCIT:C12443

BTO:0000233

MIAA:0000108

UMLS:C0007776

MESH:D002540

CALOHA:TS-0091

Wikipedia:Cerebral_cortex

EFO:0000328

VHOG:0000722

BAMS:C

BAMS:CTX

BAMS:Cx

BM:Tel-Cx

DHBA:10159

EHDAA:5464

EV:0100166

FMA:61830

GAID:629

HBA:4008

MA:0000185

MBA:688

definition

The thin layer of gray matter on the surface of the cerebral hemisphere that develops from the telencephalon. It consists of the neocortex (6 layered cortex or isocortex), the hippocampal formation and the olfactory cortex.

depiction

http://upload.wikimedia.org/wikipedia/commons/9/9a/Brainmaps-macaque-hippocampus.jpg

http://upload.wikimedia.org/wikipedia/commons/7/7b/Cerebral_Cortex_location.jpg

external_definition

The cerebral cortex is a structure within the brain that plays a key role in memory, attention, perceptual awareness, thought, language, and consciousness. It constitutes the outermost layer of the cerebrum. In preserved brains, it has a grey color, hence the name 'grey matter'. Grey matter is formed by neurons and their unmyelinated fibers, whereas the white matter below the grey matter of the cortex is formed predominantly by myelinated axons interconnecting different regions of the central nervous system. The human cerebral cortex is 2-4 mm (0.08-0.16 inches) thick. The surface of the cerebral cortex is folded in large mammals, such that more than two-thirds of the cortical surface is buried in the grooves, called 'sulci. ' The phylogenetically most recent part of the cerebral cortex, the neocortex, also called isocortex, is differentiated into six horizontal layers; the more ancient part of the cerebral cortex, the hippocampus (also called archicortex), has at most three cellular layers, and is divided into subfields. Relative variations in thickness or cell type (among other parameters) allow us to distinguish between different neocortical architectonic fields. The geometry of at least some of these fields seems to be related to the anatomy of the cortical folds, and, for example, layers in the upper part of the cortical ridges seem to be more clearly differentiated than in its deeper parts. [WP,unvetted][Wikipedia:Cerebral_cortex].

has_exact_synonym

cortex of cerebral hemisphere

has_obo_namespace

uberon

has_related_synonym

cortical plate (areas)

pallium of the brain

cortical plate (CTXpl)

cortex cerebri

brain cortex

cortex cerebralis

homology_notes

Migration of neurons from the basal or striatal portions of the anterior part of the neural tube occurs to varying degrees in different vertebrate classes, but a true cerebral cortex is generally acknowledged to have made its first appearance in reptiles. The definition can be unambiguous, since 'cortex' simply implies the existence of a surface neuronal layer with an overlying 'zonal lamina' or 'molecular' layer containing dendrites and axons, which is separated from the underlying basal 'matrix' by white matter. Although reptilian cerebral cortex does indeed fulfill these conditions in certain locations, the separation from striatal structures is often indistinct, so that it may even be argued that some primitive dipnoans possess a pallium or cortex. Nevertheless, an extensive laminated layer separated by underlying white matter is well represented only in reptiles and mammals.[well established][VHOG]

id

UBERON:0000956

in_subset

http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

cerebral cortex

notation

UBERON:0000956

part_of

http://purl.obolibrary.org/obo/UBERON_0000203

http://purl.obolibrary.org/obo/UBERON_0001017

http://purl.obolibrary.org/obo/UBERON_0001016

RO_0002175

http://purl.obolibrary.org/obo/NCBITaxon_117569

http://purl.obolibrary.org/obo/NCBITaxon_9606

taxon_notes

hagfishes have independently evolved a highly laminated cerebral cortex, comparable in many ways to the cerebral cortex of mammals [http://icb.oxfordjournals.org/content/42/4/743]

treeView

http://purl.obolibrary.org/obo/UBERON_0000203

http://purl.obolibrary.org/obo/UBERON_0001017

http://purl.obolibrary.org/obo/UBERON_0001016

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000061

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