Biological Pathway Taxonomy

Last uploaded: March 30, 2022
Preferred Name

Glycolysis
Synonyms

PathwayType: signaling

Organ: generic

PMID: 26273330

Pathway_Author: A. Nesterova ORCID:0000-0002-9448-8101

Organ_System: generic

Tissue: generic

Source: Biological Process

Link: https://mammal-profservices.pathwaystudio.com/app/sd?urn=urn:agi-pathway:uuid-58b7afd4-a08d-450a-aadb-b5227e743518

Notes: Headnote: Glycolysis is the metabolic pathway that converts glucose to pyruvate. Glycolysis can occur with or without oxygen. In the presence of oxygen, glycolysis is the first stage of cellular respiration. Signaling description: Glycolysis includes ten reactions involving ten intermediate compounds. The intermediates provide entry points to glycolysis and can be divided into two phases including preparatory and pay-off. The first five reactions are regarded as the preparatory phase resulting in the formation of two three-carbon sugar phosphates such as dihydroxyacetone-P and glyceraldehyde-3-P. The pay-off phase leads to the production of pyruvate, ATP, and NAPH. There are several enzymes catalyzing the same reactions which indicate that different protein isomers exist in different tissues. Outcome effects: In addition to pyruvate, which enters the following stages of energy metabolism, glycolysis also yields two molecules of ATP and two high energy electrons carrying molecules of NADH. References: 1). Berg JM, Tymoczko JL, Stryer L. (2007) Biochemistry (6th ed.). New York: Freeman. p. 622. 2). Garrett R, Grisham CM (2005) Biochemistry (3rd ed.). Belmont, CA: Thomson Brooks/Cole. p.584.

PMID: 23159371

NodeType: Pathway

Description: Glycolysis is the metabolic pathway that converts glucose to pyruvate. Pathway is built manually using published studies.

CellType: generic

ID

urn:agi-pathway:uuid-58b7afd4-a08d-450a-aadb-b5227e743518

database_cross_reference

PS:PathwayType

PS:Description

PS:Tissue

PS:Pathway_Author

PS:Link

PS:CellType

PS:Organ_System

PS:PMID

PS:NodeType

PS:Notes

PS:Organ

PS:Source

has_exact_synonym

PathwayType: signaling

Organ: generic

PMID: 26273330

Pathway_Author: A. Nesterova ORCID:0000-0002-9448-8101

Organ_System: generic

Tissue: generic

Source: Biological Process

Link: https://mammal-profservices.pathwaystudio.com/app/sd?urn=urn:agi-pathway:uuid-58b7afd4-a08d-450a-aadb-b5227e743518

Notes: Headnote: Glycolysis is the metabolic pathway that converts glucose to pyruvate. Glycolysis can occur with or without oxygen. In the presence of oxygen, glycolysis is the first stage of cellular respiration. Signaling description: Glycolysis includes ten reactions involving ten intermediate compounds. The intermediates provide entry points to glycolysis and can be divided into two phases including preparatory and pay-off. The first five reactions are regarded as the preparatory phase resulting in the formation of two three-carbon sugar phosphates such as dihydroxyacetone-P and glyceraldehyde-3-P. The pay-off phase leads to the production of pyruvate, ATP, and NAPH. There are several enzymes catalyzing the same reactions which indicate that different protein isomers exist in different tissues. Outcome effects: In addition to pyruvate, which enters the following stages of energy metabolism, glycolysis also yields two molecules of ATP and two high energy electrons carrying molecules of NADH. References: 1). Berg JM, Tymoczko JL, Stryer L. (2007) Biochemistry (6th ed.). New York: Freeman. p. 622. 2). Garrett R, Grisham CM (2005) Biochemistry (3rd ed.). Belmont, CA: Thomson Brooks/Cole. p.584.

PMID: 23159371

NodeType: Pathway

Description: Glycolysis is the metabolic pathway that converts glucose to pyruvate. Pathway is built manually using published studies.

CellType: generic

id

urn:agi-pathway:uuid-58b7afd4-a08d-450a-aadb-b5227e743518

label

Glycolysis

notation

uuid-58b7afd4-a08d-450a-aadb-b5227e743518

prefLabel

Glycolysis

treeView

urn:agi-folder:eating_behavior_and_metabolism_regulation

urn:agi-folder:g

urn:agi-folder:generic

subClassOf

urn:agi-folder:eating_behavior_and_metabolism_regulation

urn:agi-folder:g

urn:agi-folder:generic

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http://dicom.nema.org/resources/ontology/DCM/126034 DCM LOOM
http://localhost/plosthes.2017-1#455 PLOSTHES LOOM
http://purl.obolibrary.org/obo/UPa_UPA00109 UPA LOOM
http://purl.obolibrary.org/obo/NCIT_C28152 BERO LOOM
http://purl.obolibrary.org/obo/GO_0006096 GO-EXT LOOM
http://purl.obolibrary.org/obo/GO_0006096 FTC LOOM
http://purl.obolibrary.org/obo/HINO_0015271 HINO LOOM
http://www.projecthalo.com/aura#Glycolysis AURA LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#G02.111.087.160.750 RH-MESH LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0017952 OCHV LOOM
http://purl.org/obo/owl/GO#GO_0006096 BIOMODELS LOOM
http://purl.obolibrary.org/obo/GMM_4 GMM LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#G03.495.256.750 RH-MESH LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#G03.495.335.436 RH-MESH LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#G03.495.553.360 RH-MESH LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D006019 RH-MESH LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#5620 OCHV LOOM
http://purl.bioontology.org/ontology/CSP/1439-5214 CRISP LOOM
http://purl.obolibrary.org/obo/MESH_D006019 BERO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#G02.149.115.160.750 RH-MESH LOOM
http://purl.jp/bio/4/id/200906098874014059 IOBC LOOM
http://purl.bioontology.org/ontology/MESH/D006019 MESH LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C28152 NCIT LOOM
http://purl.obolibrary.org/obo/OMIT_0007208 OMIT LOOM