Biological Pathway Taxonomy

Last uploaded: March 30, 2022
Preferred Name

T-Cell Acute Lymphoblastic Leukemia

Synonyms

PathwayType: signaling

PMID: 16826225

PMID: 20800819

CellType: T-cell

PMID: 18488097

Notes: Headnote: T-cell acute lymphoblastic leukemia (T-ALL) results from the malignant transformation of T-cells and represents 15% of childhood and 25% of adult ALL cases. T-ALL patients frequently present high peripheral blast counts, central nervous system dissemination, and larger mediastinal masses at diagnosis. Signaling description: Several recurrent genetic alterations have been identified in T-ALL. Chromosomal translocations occur in about 20% of cases and result in either fusions between the coding regions of two genes which leads to chimeric protein expression, or fusions between proto-oncogenes and T-cell receptor (TCR) loci which triggers oncogene overexpression (e.g., TAL1, TAL2, TLX1, TLX3, HOXA, LMO1, LMO2, MYB, and others). Aberrations involving TCR gene regions can be detected in 35% of patients. One of the most frequent types of alterations in T-ALL (more than 50% of cases) is NOTCH1 mutations which initiate the activation of NOTCH1-dependent transcriptional programs. In addition, deletion or inactivating mutations in CDKN2A and CDKN2B genes occur in about 70% of cases. Furthermore, JAK1 is mutated in 18% of adult patients with T-ALL; clinically, these patients may represent an unfavorable prognostic subgroup. The activation of several signaling pathways including PI3K/Akt, MAPK, JAK-STAT, and NF-kB has also been reported in T-ALL. Additionally, IL7 production by microenvironment and CXCL12/CXCR4 interaction between stromal cells and T-cells were found to be important for T-ALL development. Outcome effects: All of the described events lead to block of apoptosis, block of differentiation, and uncontrolled proliferation that promote development and progression of T-ALL. Highlighted proteins: Proteins with increased expression or activity are highlighted in red, and proteins with decreased expression or activity are highlighted in blue.

PMID: 18379008

PMID: 19181788

Tissue: blood

CellType: cancer cell

PMID: 17329966

Link: https://mammal-profservices.pathwaystudio.com/app/sd?urn=urn:agi-pathway:uuid-0ca5e9dc-0a4b-4bb7-9240-b28e74e69729

PMID: 20861166

Tissue: bone marrow

PMID: 18596915

Description: T-cell acute lymphoblastic leukemia (T-ALL) results from the malignant transformation of T-cells and represents 15? of childhood and 25? of adult ALL cases. Pathway is built manually using published studies.

NodeType: Pathway

Pathway_Author: S. Sozin www.researchgate.net/profile/Sergey-Sozin

PMID: 18691165

Source: Diseases

ID

urn:agi-pathway:uuid-0ca5e9dc-0a4b-4bb7-9240-b28e74e69729

database_cross_reference

PS:PathwayType

PS:Description

PS:Tissue

PS:Pathway_Author

PS:Link

PS:CellType

PS:PMID

PS:NodeType

PS:Notes

PS:Source

has_exact_synonym

PathwayType: signaling

PMID: 16826225

PMID: 20800819

CellType: T-cell

PMID: 18488097

Notes: Headnote: T-cell acute lymphoblastic leukemia (T-ALL) results from the malignant transformation of T-cells and represents 15% of childhood and 25% of adult ALL cases. T-ALL patients frequently present high peripheral blast counts, central nervous system dissemination, and larger mediastinal masses at diagnosis. Signaling description: Several recurrent genetic alterations have been identified in T-ALL. Chromosomal translocations occur in about 20% of cases and result in either fusions between the coding regions of two genes which leads to chimeric protein expression, or fusions between proto-oncogenes and T-cell receptor (TCR) loci which triggers oncogene overexpression (e.g., TAL1, TAL2, TLX1, TLX3, HOXA, LMO1, LMO2, MYB, and others). Aberrations involving TCR gene regions can be detected in 35% of patients. One of the most frequent types of alterations in T-ALL (more than 50% of cases) is NOTCH1 mutations which initiate the activation of NOTCH1-dependent transcriptional programs. In addition, deletion or inactivating mutations in CDKN2A and CDKN2B genes occur in about 70% of cases. Furthermore, JAK1 is mutated in 18% of adult patients with T-ALL; clinically, these patients may represent an unfavorable prognostic subgroup. The activation of several signaling pathways including PI3K/Akt, MAPK, JAK-STAT, and NF-kB has also been reported in T-ALL. Additionally, IL7 production by microenvironment and CXCL12/CXCR4 interaction between stromal cells and T-cells were found to be important for T-ALL development. Outcome effects: All of the described events lead to block of apoptosis, block of differentiation, and uncontrolled proliferation that promote development and progression of T-ALL. Highlighted proteins: Proteins with increased expression or activity are highlighted in red, and proteins with decreased expression or activity are highlighted in blue.

PMID: 18379008

PMID: 19181788

Tissue: blood

CellType: cancer cell

PMID: 17329966

Link: https://mammal-profservices.pathwaystudio.com/app/sd?urn=urn:agi-pathway:uuid-0ca5e9dc-0a4b-4bb7-9240-b28e74e69729

PMID: 20861166

Tissue: bone marrow

PMID: 18596915

Description: T-cell acute lymphoblastic leukemia (T-ALL) results from the malignant transformation of T-cells and represents 15? of childhood and 25? of adult ALL cases. Pathway is built manually using published studies.

NodeType: Pathway

Pathway_Author: S. Sozin www.researchgate.net/profile/Sergey-Sozin

PMID: 18691165

Source: Diseases

id

urn:agi-pathway:uuid-0ca5e9dc-0a4b-4bb7-9240-b28e74e69729

label

T-Cell Acute Lymphoblastic Leukemia

notation

uuid-0ca5e9dc-0a4b-4bb7-9240-b28e74e69729

prefLabel

T-Cell Acute Lymphoblastic Leukemia

treeView

urn:agi-folder:t

urn:agi-folder:t-cell_acute_lymphoblastic_leukemia

urn:agi-folder:blood

subClassOf

urn:agi-folder:t

urn:agi-folder:t-cell_acute_lymphoblastic_leukemia

urn:agi-folder:blood

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