Brain-Computer Interaction (BCI) Ontology - Transition - Classes | NCBO BioPortal

Brain-Computer Interaction (BCI) Ontology

Last uploaded: June 6, 2018

Id	http://www.ontologydesignpatterns.org/ont/dul/DUL.owl#Transition http://www.ontologydesignpatterns.org/ont/dul/DUL.owl#Transition
Preferred Name	Transition
Definitions	A transition is a Situation that creates a context for three TimeInterval(s), two additional different Situation(s), one Event, one Process, and at least one Object: the Event is observed as the cause for the transition, one Situation is the state before the transition, the second Situation is the state after the transition, the Process is the invariance under some different transitions (including the one represented here), in which at least one Object is situated. Finally, the time intervals position the situations and the transitional event in time. This class of situations partly encodes the ontology underlying typical engineering algebras for processes, e.g. Petri Nets. A full representation of the transition ontology is outside the expressivity of OWL, because we would need qualified cardinality restrictions, coreference, property equivalence, and property composition.
Type	http://www.w3.org/2002/07/owl#Class

definition	A transition is a Situation that creates a context for three TimeInterval(s), two additional different Situation(s), one Event, one Process, and at least one Object: the Event is observed as the cause for the transition, one Situation is the state before the transition, the second Situation is the state after the transition, the Process is the invariance under some different transitions (including the one represented here), in which at least one Object is situated. Finally, the time intervals position the situations and the transitional event in time. This class of situations partly encodes the ontology underlying typical engineering algebras for processes, e.g. Petri Nets. A full representation of the transition ontology is outside the expressivity of OWL, because we would need qualified cardinality restrictions, coreference, property equivalence, and property composition.
preferred label	Transition
label	Transition
comment	A transition is a Situation that creates a context for three TimeInterval(s), two additional different Situation(s), one Event, one Process, and at least one Object: the Event is observed as the cause for the transition, one Situation is the state before the transition, the second Situation is the state after the transition, the Process is the invariance under some different transitions (including the one represented here), in which at least one Object is situated. Finally, the time intervals position the situations and the transitional event in time. This class of situations partly encodes the ontology underlying typical engineering algebras for processes, e.g. Petri Nets. A full representation of the transition ontology is outside the expressivity of OWL, because we would need qualified cardinality restrictions, coreference, property equivalence, and property composition.
prefLabel	Transition
note	A transition is a Situation that creates a context for three TimeInterval(s), two additional different Situation(s), one Event, one Process, and at least one Object: the Event is observed as the cause for the transition, one Situation is the state before the transition, the second Situation is the state after the transition, the Process is the invariance under some different transitions (including the one represented here), in which at least one Object is situated. Finally, the time intervals position the situations and the transitional event in time. This class of situations partly encodes the ontology underlying typical engineering algebras for processes, e.g. Petri Nets. A full representation of the transition ontology is outside the expressivity of OWL, because we would need qualified cardinality restrictions, coreference, property equivalence, and property composition.
isDefinedBy	http://www.ontologydesignpatterns.org/ont/dul/DUL.owl
prefixIRI	Transition
subClassOf	http://www.ontologydesignpatterns.org/ont/dul/DUL.owl#Situation
type	http://www.w3.org/2002/07/owl#Class

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Add NCBO Web Widgets to your site for BCI-O

Widget type	Widget demonstration
Jump To Type a class name from BCI-O and jump to it in BioPortal Get code	Step 2: Follow the Instructions Download the quick_jump.js file and put it on your server Copy the code below and paste it to your HTML page Note: If you would like to use Quick Jump across multiple ontologies: You can enter a comma-separated list of ontology ids: var BP_ontology_id = "NCIt,SNOMEDCT"; You can set the variable to 'all' to search all ontologies in BioPortal: var BP_ontology_id = "all"; To include definitions in the Jump To drop-down, add the following variable in Javascript: var BP_include_definitions = true; In the code that you just pasted, make sure to change the path to the quick_jump.js file to point to the location where you put the file (relative to your HTML file) For example, if you put the quick_jump.js file in the same directory as your HTML file, this is the code you would use: <div id="bp_quick_jump"></div> <script type="text/javascript"> var BP_ontology_id = "BCI-O";</script> <script src="quick_jump.js" type="text/javascript" charset="utf-8"></script> For more help visit NCBO Widget Wiki
Form Autocomplete Fill your form fields with classes from BCI-O Get code	Example 1 (start typing the class name to get its full URI) Example 2 (get the ID for a class) Example 3 (get the preferred name for a class) Step 2: Follow the Instructions Download the form_complete.js file and put it on your server. In the header for the page where you want the form field, include the form_complete.js file. On your form, for the fields where you want to use the class-selection widget, specify the field's class in the following format: `bp_form_complete-{ontology_id_list}-{value}` For example, `bp_form_complete-NCIT-uri` will use NCI Thesaurus (ontology id is NCIT) and will put the class URI in the field after the user selects the class from the pull-down list. Note: In addition to single ontology ids, you can use a list: `bp_form_complete-NCIT,NCBITAXON-uri` OR use 'all' to search across all BioPortal ontologies: `bp_form_complete-all-uri` The autocomplete widget accesses ontology content from the latest version of the ontology. You can use the following parameters to select which value will be placed into the user-visible input field: `uri` put the complete URI of the class (e.g., http://www.ontologydesignpatterns.org/ont/dul/DUL.owl#Transition ) `shortid` put the short id of the class, as used in BioPortal (e.g., "Common_Neoplasm"); `name` put the preferred name of the class (e.g., "Common Neoplasm"); In addition to the input element you defined, there are four hidden form elements that are created and then set when a user selects a class from the list. For example, if you create a field with this code: <input type="text" name="a" class="bp_form_complete-all-uri" size="100"/> The 'name' attribute is used to create the four following fields (note how the 'a' from the name attribute is appended to the id attribute): <input type="hidden" id="a_bioportal_preferred_name"> <input type="hidden" id="a_bioportal_concept_id"> <input type="hidden" id="a_bioportal_ontology_id"> <input type="hidden" id="a_bioportal_full_id"> Additional parameters are documented on the NCBO Widget Wiki For more help visit NCBO Widget Wiki
Visualization Display a visualization for a given class in BCI-O Get code	Step 2: Follow the Instructions Copy the code below and paste it to your HTML page <iframe frameborder="0" src="/widgets/visualization?ontology=BCI-O&class=http%3A%2F%2Fwww.ontologydesignpatterns.org%2Font%2Fdul%2FDUL.owl%23Transition&apikey=YOUR_API_KEY"></iframe> For more help visit NCBO Widget Wiki
Tree Widget Display a class tree with a search field for BCI-O Get code	Step 2: Follow the Instructions Copy the code below and paste it to your HTML page <link rel="stylesheet" type="text/css" href="/widgets/jquery.ncbo.tree.css"> <script src="/widgets/jquery.ncbo.tree-2.0.2.js"></script> <div id="widget_tree"></div> var widget_tree = $("#widget_tree").NCBOTree({ apikey: "YOUR_API_KEY", ontology: "BCI-O" }); You can also view a detailed demonstration For more help visit NCBO Widget Wiki