Ontology for Biomedical Investigations

Last uploaded: September 4, 2018
Ontology Mappings
Adverse Event Reporting Ontology 199
Allergy Detector II 1
Alzheimer's disease ontology 46
Amino Acid Ontology 1
Amphibian Gross Anatomy Ontology 20
An ontology for experimental actions 17
Anatomic Pathology Lexicon 4
Anatomical Entity Ontology 11
Anatomical Therapeutic Chemical Classification 21
Animal Natural History and Life History Ontology 9
Animal Trait Ontology for Livestock 2
APA Neuro Cluster 3
APA Statistical Cluster 1
APA Treatment Cluster 3
Artificial Intelligence Rheumatology Consultant System Ontology 7
Ascomycete Phenotype Ontology 1
Autism DSM-ADI-R ontology 26
Autism Spectrum Disorder Phenotype Ontology 2
Basic Formal Ontology 20
Beta Cell Genomics Ontology 761
Bilingual Ontology of Alzheimer's Disease and Related Diseases 37
BioAssay Ontology 115
Biodiversity Ontology 3
Bioinformatics Web Service Ontology 68
Biological Collections Ontology 67
Biological Imaging Methods Ontology 6
Biological Observation Matrix Ontology 105
Biologie Hors Nomenclature 1
BioMedBridges Diabetes Ontology 3
Biomedical Image Ontology 6
Biomedical Informatics Research Network Project Lexicon 79
Biomedical Research Integrated Domain Group Model 11
Biomedical Resource Ontology 31
Biomedical Topics 5
BioModels Ontology 328
Bionutrition Ontology 1
BioPAX Ontology of Biological Pathways 2
BioPortal Metadata Ontology 1
BioTop Ontology 21
Bleeding History Phenotype Ontology 10
Body System Terms from ICD11 1
Bone and Cartilage Tissue Engineering Ontology 15
Bone Dysplasia Ontology 82
Botryllus schlosseri anatomy and development ontology 2
Brain Region & Cell Type terminology 4
Breast Cancer Grading Ontology 6
Breast Tissue Cell Lines Ontology 5
BRENDA Tissue and Enzyme Source Ontology 30
Brucellosis Ontology 119
C. elegans Gross Anatomy Vocabulary 11
Cancer Chemoprevention Ontology 31
Cancer Research and Management ACGT Master Ontology 71
Cardiac Electrophysiology Ontology 134
CARRE Risk Factor ontology 2
Cell Behavior Ontology 4
Cell Culture Ontology 238
Cell Cycle Ontology 43
Cell Line Ontology 115
Cell Line Ontology [by Mahadevan] 22
Cell Ontology 127
Cellular microscopy phenotype ontology 37
Cereal Plant Gross Anatomy Ontology 1
Cerebrotendinous Xanthomatosis Ontology 4
Cerrado concepts and plant community dynamics 4
Chemical Entities of Biological Interest Ontology 283
Chemical Information Ontology 210
Chemical Methods Ontology 82
Cigarette Smoke Exposure Ontology 120
Clinical Signs and Symptoms Ontology 1
Clinical Trials Ontology 10
Clusters of Orthologous Groups (COG) Analysis Ontology 52
Coding Symbols for a Thesaurus of Adverse Reaction Terms 10
Cognitive Atlas Ontology 5
Cognitive Paradigm Ontology 165
Common Anatomy Reference Ontology 6
Common Terminology Criteria for Adverse Events 1
Comparative Data Analysis Ontology 12
Computational Neuroscience Ontology 32
Computer Assisted Brain Injury Rehabilitation Ontology 3
computer network 1
Computer Retrieval of Information on Scientific Projects Thesaurus 121
Computer-Based Patient Record Ontology 32
Content Archive Resource Exchange Lexicon 1
CPTAC Proteomics Pipeline Infrastructure Ontology 2
Current Procedural Terminology 9
CYTOKINE 3
Dataset processing 24
DebugIT Core Ontology 43
Dengue Fever Ontology 76
Dermatology Lexicon 1
Diagnosis Ontology of Clinical Care Classification 1
Diagnostic Ontology 2
DICOM Controlled Terminology 12
Dictyostelium Discoideum Anatomy Ontology 1
Disease core ontology applied to Rare Diseases 3
Disorders cluster 1
Dispedia Core Ontology 3
Drosophila Development Ontology 3
Drosophila Gross Anatomy Ontology 16
Drug Interaction and Evidence Ontology 185
Drug Interaction Knowledge Base Ontology 10
Eagle-I Research Resource Ontology 646
EDAM bioinformatics operations, types of data, data formats, identifiers, and topics 26
EDDA Study Designs Taxonomy 6
Electrocardiography Ontology 37
Eligibility Feature Hierarchy 4
Emotion Ontology 48
eNanoMapper 820
Environment Ontology 14
Enzyme Reaction Ontology for annotating Partial Information of chemical transformation 5
Epilepsy and Seizure Ontology 19
Epilepsy Ontology 1
Epilepsy Syndrome Seizure Ontology 9
Epoch Clinical Trial Ontology 2
Experimental Conditions Ontology 10
Experimental Factor Ontology 2,799
Exposure Ontology 8
Fanconi Anemia Ontology 6
Fission Yeast Phenotype Ontology 54
Fly Taxonomy 19
FlyBase Controlled Vocabulary 26
Foundational Model of Anatomy 37
G Protein-Coupled Receptor BioAssays Ontology 5
Galen Ontology 107
Gazetteer 9
Gene Expression Ontology 41
Gene Ontology 145
Gene Ontology Extension 133
Gene Regulation Ontology 1
General Formal Ontology 9
General Formal Ontology for Biology 19
Genome Component Ontology 2
Genomic Clinical Decision Support Ontology 1
Genomic Feature and Variation Ontology 17
GeoSpecies Ontology 13
Glycomics Ontology 12
go-plus 239
Graphical Pathway Markup Language 1
Growth Medium Onotology 18
Health Level Seven Reference Implementation Model, Version 3 60
Healthcare Common Procedure Coding System 6
HIVOntologymain.owl 22
Host Pathogen Interactions Ontology 53
Human Dermatological Disease Ontology 1
Human Developmental Anatomy Ontology, abstract version 1 91
Human Developmental Anatomy Ontology, abstract version 2 15
Human Developmental Anatomy Ontology, timed version 316
Human Disease Ontology 2
Human Genome Organization Gene Symbols 2
Human Interaction Network Ontology 57
Human Phenotype Ontology 6
Human Physiology Simulation Ontology 141
Hymenoptera Anatomy Ontology 9
Image and Data Quality Assessment Ontology 6
Immunogenetics Ontology 6
Infectious Disease Ontology 71
Influenza Ontology 297
Information Artifact Ontology 179
Informed Consent Ontology 230
Interaction Network Ontology 27
Interaction Ontology 2
International Classification for Nursing Practice 30
International Classification for Patient Safety 5
International Classification of External Causes of Injuries 1
International Classification of Diseases, Version 10 7
International Classification of Diseases, Version 10 - Clinical Modification 8
International Classification of Diseases, Version 10 - Procedure Coding System 6
International Classification of Diseases, Version 9 - Clinical Modification 6
International Classification of Primary Care 6
International Classification of Primary Care - 2 PLUS 17
Just Enough Results Model Ontology 31
KB_Bio_101 114
Kidney Tissue Atlas Ontology 150
Lipid Ontology 4
Loggerhead Nesting Ontology 3
Logical Observation Identifier Names and Codes 178
Magnetic Resonance Dataset Acquisition Ontology 22
Major Histocompatibility Complex Ontology 4
Malaria Ontology 67
Mammalian Phenotype Ontology 195
Mass Spectrometry Ontology 86
Master Drug Data Base Clinical Drugs 6
Measurement Method Ontology 12
Medaka Fish Anatomy and Development Ontology 4
Medical Dictionary for Regulatory Activities 35
Medical image simulation 47
Medical Subject Headings 117
MedlinePlus Health Topics 15
Menelas Project Top-Level Ontology 3
Mental Functioning Ontology 48
Mental State Assessment 21
Metagenome and Microbes Environmental Ontology 13
Microarray and Gene Expression Data Ontology 25
Microbial Culture Collection Vocabulary 2
Microbial Phenotype Ontology 4
Microbial Typing Ontology 11
MicroRNA Ontology 40
Minimal Anatomical Terminology 10
Minimal Information about any Sequence (MIxS) Controlled Vocabularies 8
Minimal Information about any Sequence Ontology 2
Minimal Standard Terminology of Digestive Endoscopy 9
Minimal Standard Terminology of Digestive Endoscopy, French 9
Mobile Genetic Element Ontology 1
Molecular Interaction Map 2
Mosquito Gross Anatomy Ontology 6
Mosquito Insecticide Resistance 24
Mouse Adult Gross Anatomy Ontology 15
Mouse Experimental Design Ontology 1
Mouse Pathology Ontology 1
Multiple sclerosis ontology 14
MyOntoServiceFull_FallDetection 5
Name Reaction Ontology 10
NanoParticle Ontology 88
National Cancer Institute Thesaurus 276
National Center for Biotechnology Information (NCBI) Organismal Classification 40
National Drug Data File 16
National Drug File - Reference Terminology 20
Natural Products Ontology 12
Neglected Tropical Disease Ontology 24
Neomark Oral Cancer Ontology, version 3 5
Neomark Oral Cancer Ontology, version 4 24
Neural ElectroMagnetic Ontology 83
Neural Motor Recovery Ontology 15
Neural-Immune Gene Ontology 54
Neuro Behavior Ontology 301
NeuroMorpho.Org species ontology 19
Neuroscience Information Framework (NIF) Cell Ontology 103
Neuroscience Information Framework (NIF) Dysfunction Ontlogy 100
Neuroscience Information Framework (NIF) Standard Ontology 1,171
Neuroscience Information Framework (NIF) Subcellular Ontology 103
NGS ontology 44
NIH NLM Value Sets 1
NMR-Controlled Vocabulary 71
Non-coding RNA Ontology 49
Non-Randomized Controlled Trials Ontology 3
Nursing Care Coordination Ontology 10
Online Mendelian Inheritance in Man 16
Ontological Knowledge Base Model for Cystic Fibrosis 2
Ontology for Biobanking 307
Ontology for Drug Discovery Investigations 146
Ontology for General Medical Science 53
Ontology for Genetic Disease Investigations 39
Ontology for Genetic Interval 62
Ontology for Genetic Susceptibility Factor 105
Ontology for MicroRNA Target 46
Ontology for Newborn Screening Follow-up and Translational Research 213
Ontology for Parasite LifeCycle 42
Ontology of Adverse Events 89
Ontology of Alternative Medicine, French 4
Ontology of Biological and Clinical Statistics 490
Ontology of Clinical Research 21
Ontology of Core Data Mining Entities 210
Ontology of Data Mining Investigations 31
Ontology of Datatypes 18
Ontology of Drug Neuropathy Adverse Events 40
Ontology of Experimental Variables and Values 15
Ontology of Genes and Genomes 46
Ontology of Genes and Genomes - Mouse 38
Ontology of Host-Microbe Interactions 69
Ontology of Liver for Radiology 3
Ontology of Medically Related Social Entities 48
Ontology of Nuclear Toxicity 14
Ontology of Physics for Biology 6
Ontology of Pneumology 5
Ontology of Vaccine Adverse Events 36
OntoPsychia, social module 2
Orphanet Rare Disease Ontology 4
Parasite Experiment Ontology 113
Parkinson's Disease Ontology 2
Pathogenic Disease Ontology 1
Pediatric Terminology 15
Pharmacogenomic Relationships Ontology 15
Pharmacovigilance Ontology 15
Phenotypic Quality Ontology 65
PhenX Phenotypic Terms 2
Phylogenetic Ontology 2
Physical Medicine and Rehabilitation 7
Physician Data Query 13
Physico-Chemical Methods and Properties 9
Physico-Chemical Process 5
Pipeline Patterns Ontology 4
Plant Anatomy 1
Plant Diversity Ontology 15
Plant Experimental Assay Ontology 15
Plant Experimental Conditions Ontology 2
Plant Ontology 1
Population and Community Ontology 34
Porifera Ontology 18
Portfolio Management Application 14
Protein Ontology 34
Protein-ligand interaction ontology 3
Proteomics Data and Process Provenance Ontology 11
Provenance Ontology 5
Psychology Ontology 23
Quantitative Imaging Biomarker Ontology 28
Quantities, Units, Dimensions, and Types Ontology 7
Radiation Oncology Ontology 25
Radiology Lexicon 47
Randomized Controlled Trials Ontology 3
Read Codes, Clinical Terms Version 3 (CTV3) 98
Reference Sequence Annotation 2
RegenBase ontology 27
Regional Healthcare System Interoperability and Information Exchange Measurement Ontology 1
Regulation of Gene Expression Ontolology 39
Regulation of Transcription Ontology 36
Reproductive Trait and Phenotype Ontology 1
Research Network and Patient Registry Inventory Ontology 2
Resource of Asian Primary Immunodeficiency Diseases (RAPID) Phenotype Ontology 2
RNA Ontology 23
Robert Hoehndorf Version of MeSH 290
Role Ontology 2
RxNORM 21
Sage Bionetworks Synapse Ontology 136
Sample Processing and Separation Techniques Ontology 22
Santa Barbara Coastal Observation Ontology 20
schema.org 12
Semantic DICOM Ontology 4
Semantic Types Ontology 6
Semantic Web for Earth and Environment Technology Ontology 69
Semanticscience Integrated Ontology 105
Sequence Types and Features Ontology 20
Single-Nucleotide Polymorphism (SNP) Ontology 33
Situation-Based Access Control Ontology 7
Skin Physiology Ontology 12
Sleep Domain Ontology 58
SMART Protocols 60
SMASH Ontology 2
SNOMED CT 205
Software Ontology 48
Solanaceae Phenotype Ontology 1
Spider Ontology 2
Statistics Ontology 304
Student Health Record Ontology 9
Stuff Ontology 4
Subcellular Anatomy Ontology 31
Suggested Ontology for Pharmacogenomics 178
suicideonto 18
Surgical Secondary Events 2
Synthetic Biology Open Language Visual Ontology 1
Systematized Nomenclature of Medicine, International Version 66
Systems Biology Ontology 12
Systems Chemical Biology and Chemogenomics Ontology 4
Taxonomy for Rehabilitation of Knee Conditions 23
Teleost Anatomy Ontology 40
Teleost Taxonomy Ontology 1
Terminological and Ontological Knowledge Resources Ontology 10
The Drug Ontology 81
The Drug-Drug Interactions Ontology 28
The Ecosystem Ontology 38
Tick Gross Anatomy Ontology 6
Time Event Ontology 209
Translational Medicine Ontology 104
Tribolium Ontology 3
Uber Anatomy Ontology 44
Units of Measurement Ontology 11
Units Ontology 6
Upper-Level Cancer Ontology 3
Vaccination Informed Consent Ontology 2
Vaccine Ontology 131
Variation Ontology 6
Vertebrate Homologous Organ Group Ontology 21
Vertebrate Skeletal Anatomy Ontology 10
Vertebrate Taxonomy Ontology 12
Veterans Health Administration National Drug File 23
Vital Sign Ontology 49
VIVO Ontology for Researcher Discovery 18
VIVO-Integrated Semantic Framework 78
WikiPathways 7
World Health Organization (WHO) Adverse Reaction Terminology 9
XEML Environment Ontology 5
Xenopus Anatomy Ontology 21
Zebrafish Anatomy and Development Ontology 27