National Cancer Institute Thesaurus

Last uploaded: February 23, 2024
Preferred Name

ChIP-Seq

Synonyms

Chromatin Immunoprecipitation Sequencing

ChIP-Seq (chromatin ImmunoPrecipitation)

ChIP-Sequencing

ChIP-Seq

Definitions

A molecular genetic technique that combines chromatin immunoprecipitation (ChIP) with massively parallel DNA sequencing to map the binding sites of DNA-associated proteins in a sample of cells. First, crosslinked protein-DNA complexes are isolated using ChIP. Next, the crosslinks are broken, the proteins are removed and the purified DNA is modified with adaptor oligonucleotides to facilitate massively parallel DNA sequencing. Following sequencing, the DNA sequences that are obtained can be mapped to their genomic locations.

ID

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C106049

code

C106049

Concept_In_Subset

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C157711

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C173073

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C177537

Contributing_Source

CTDC

GDC

DEFINITION

A molecular genetic technique that combines chromatin immunoprecipitation (ChIP) with massively parallel DNA sequencing to map the binding sites of DNA-associated proteins in a sample of cells. First, crosslinked protein-DNA complexes are isolated using ChIP. Next, the crosslinks are broken, the proteins are removed and the purified DNA is modified with adaptor oligonucleotides to facilitate massively parallel DNA sequencing. Following sequencing, the DNA sequences that are obtained can be mapped to their genomic locations.

FULL_SYN

Chromatin Immunoprecipitation Sequencing

ChIP-Seq (chromatin ImmunoPrecipitation)

ChIP-Sequencing

ChIP-Seq

Is_Value_For_GDC_Property

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C43622

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C177618

label

ChIP-Seq

Maps_To

ChIP-Seq

Preferred_Name

ChIP-Seq

prefixIRI

Thesaurus:C106049

Semantic_Type

Molecular Biology Research Technique

UMLS_CUI

C3831111

subClassOf

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C106048

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C153598

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C17350

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