Preferred Name

pathway

Synonyms

signaling pathway

signaling pathways

pathways

Definitions

Definition: A set or series of interactions, often forming a network, which biologists have found useful to group together for organizational, historic, biophysical or other reasons. Usage: Pathways can be used for demarcating any subnetwork of a BioPAX model. It is also possible to define a pathway without specifying the interactions within the pathway. In this case, the pathway instance could consist simply of a name and could be treated as a 'black box'. Pathways can overlap, i.e. a single interaction might belong to multiple pathways. Pathways can also contain sub-pathways. Synonyms: network, module, cascade, Examples: glycolysis, valine biosynthesis, EGFR signaling source: http://www.biopax.org/release/biopax-level3.owl#Pathway

ID

http://www.biopax.org/release/biopax-level3.owl#Pathway

definition

Definition: A set or series of interactions, often forming a network, which biologists have found useful to group together for organizational, historic, biophysical or other reasons. Usage: Pathways can be used for demarcating any subnetwork of a BioPAX model. It is also possible to define a pathway without specifying the interactions within the pathway. In this case, the pathway instance could consist simply of a name and could be treated as a 'black box'. Pathways can overlap, i.e. a single interaction might belong to multiple pathways. Pathways can also contain sub-pathways. Synonyms: network, module, cascade, Examples: glycolysis, valine biosynthesis, EGFR signaling source: http://www.biopax.org/release/biopax-level3.owl#Pathway

exact_synonym

signaling pathway

signaling pathways

pathways

label

pathway

PMID

20205586

prefixIRI

biopax_level3:Pathway

prefLabel

pathway

related_synonym

kinetic folding pathway

cancer pathways

pathway generation

O(2) migration pathways

unfolding pathway

artificial lac operon genetic network

metabolic networks

shikimate pathway

preferential flow pathways

Ras/cAMP/PKA pathway

artificial lac operon network

network

networks

source

http://www.biopax.org/release/biopax-level3.owl#Pathway

subClassOf

http://purl.obofoundry.org/obo/IAO_0000030

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Delete Mapping To Ontology Source
http://www.biopax.org/release/biopax-level3.owl#Pathway MIM SAME_URI
http://www.biopax.org/release/biopax-level3.owl#Pathway DIKB SAME_URI
http://www.biopax.org/release/biopax-level3.owl#Pathway BP SAME_URI
http://semanticscience.org/resource/SIO_001107 SIO LOOM
http://purl.obolibrary.org/obo/NCIT_C54214 PREMEDONTO LOOM
http://purl.obolibrary.org/obo/NCIT_C54214 HOIP LOOM
http://purl.obolibrary.org/obo/NCIT_C54214 TXPO LOOM
http://purl.obolibrary.org/obo/MI_0619 MI LOOM
http://vocabularies.wikipathways.org/wp#Pathway WIKIPATHWAYS LOOM
http://semanticscience.org/resource/SIO_001107 HHEARP LOOM
http://semanticscience.org/resource/SIO_001107 CHEAR LOOM
http://semanticscience.org/resource/SIO_001107 BIOMO LOOM
http://semanticscience.org/resource/SIO_001107 SCO LOOM
http://semanticscience.org/resource/SIO_001107 HHEAR LOOM
http://semanticscience.org/resource/SIO_001107 HASCO LOOM
http://scai.fraunhofer.de/CSEO#CSEO_00000987 CSEO LOOM
http://www.semanticweb.org/DMO#pathway ADMO LOOM
http://chem.deri.ie/granatum#Pathway CANCO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C54214 NCIT LOOM
http://purl.obolibrary.org/obo/BiPOm#0000001 BIPOM LOOM
http://jermontology.org/ontology/JERMOntology#Pathway JERM LOOM
https://w3id.org/biolink/vocab/Pathway BIOLINK LOOM
http://vocabularies.wikipathways.org/gpml#Pathway GPML LOOM
http://purl.obolibrary.org/obo/IEV_0000001 PTS LOOM
http://www.pepathway.org/peo/1.2#Pathway PE-O LOOM
http://rdfs.org/ns/void#Pathway WIKIPATHWAYS LOOM
http://www.ustb.edu.cn/thesauri/tocr/v1/data#C571346616598917122 ACVD_ONTOLOGY LOOM
http://purl.obolibrary.org/obo/PW_0000001 PW LOOM
http://purl.obolibrary.org/obo/PW_0000001 EPIO LOOM
http://purl.obolibrary.org/obo/PW_0000001 INO LOOM
http://purl.obolibrary.org/obo/INO_0000003 INO LOOM
http://purl.obolibrary.org/obo/INO_0000003 HINO LOOM
http://onto.eva.mpg.de/ontologies/gfo-bio.owl#Pathway GFO-BIO LOOM
http://www.semanticweb.org/ontologies/STO.owl#OWLClass_deec68f3_7954_4687_b090_de5d246e842b STO-DRAFT LOOM
http://www.semanticweb.org/ontologies/STO.owl#OWLClass_deec68f3_7954_4687_b090_de5d246e842b CVAO LOOM
http://www.w3.org/2001/sw/hcls/ns/transmed/TMO_0044 TMO LOOM
http://www.bootstrep.eu/ontology/GRO#Pathway GRO LOOM
http://knoesis.wright.edu/ParasiteExperiment.owl#pathway PEO LOOM
http://www.co-ode.org/ontologies/galen#Pathway GALEN LOOM
http://www.biopax.org/release/biopax-level3.owl#Pathway MIM LOOM
http://www.biopax.org/release/biopax-level3.owl#Pathway DIKB LOOM
http://www.biopax.org/release/biopax-level3.owl#Pathway BP LOOM