Fission Yeast Phenotype Ontology

Last uploaded: March 27, 2024
Preferred Name

pyridoxine

Synonyms

4,5-bis(hydroxymethyl)-2-methylpyridin-3-ol

pyridoxine

2-methyl-4,5-bis(hydroxymethyl)-3-hydroxypyridine

5-hydroxy-6-methyl-3,4-pyridinedimethanol

2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine

3-hydroxy-4,5-dimethylol-alpha-picoline

piridossina

2-methyl-3-hydroxy-4,5-di(hydroxymethyl)pyridine

2-methyl-4,5-dimethylol-pyridin-3-ol

2-Methyl-3-hydroxy-4,5-dihydroxymethyl-pyridin

pyridoxinum

2-methyl-3-hydroxy-4,5-dihydroxymethylpyridine

3-hydroxy-4,5-bis(hydroxymethyl)-2-methylpyridine

4,5-bis(hydroxymethyl)-2-methyl-pyridin-3-ol

pyridoxolum

3-hydroxy-2-picoline-4,5-dimethanol

Pyridoxol

pyridoxina

vitamin B6

Definitions

A hydroxymethylpyridine with hydroxymethyl groups at positions 4 and 5, a hydroxy group at position 3 and a methyl group at position 2. The 4-methanol form of vitamin B6, it is converted intoto pyridoxal phosphate which is a coenzyme for synthesis of amino acids, neurotransmitters, sphingolipids and aminolevulinic acid.

ID

http://purl.obolibrary.org/obo/CHEBI_16709

charge

0

database_cross_reference

PMID:2885064

Gmelin:563676

PMID:31093449

PMID:2580028

HMDB:HMDB0000239

KEGG:D08454

KEGG:C00314

PMID:32105687

Beilstein:139854

PMID:15369738

Chemspider:1025

PMID:9625217

PMID:16277693

PMID:33665688

AGR:IND607198670

FooDB:FDB000574

PMID:10894227

PMID:11562405

PMID:3710434

PMID:17044573

Drug_Central:2836

PMID:15132238

PMID:12640345

PMID:12768081

LINCS:LSM-5324

KNApSAcK:C00001551

Wikipedia:Pyridoxine

CAS:65-23-6

PMID:15756083

PMID:27113583

DrugBank:DB00165

PMID:24035968

PMID:22932811

PMID:33549283

PMID:559690

PMID:16236150

PMID:24601602

PMID:16690736

PMID:10687314

PMID:6624427

PMID:13046427

Reaxys:139854

MetaCyc:PYRIDOXINE

PDBeChem:UEG

PMID:6801073

definition

A hydroxymethylpyridine with hydroxymethyl groups at positions 4 and 5, a hydroxy group at position 3 and a methyl group at position 2. The 4-methanol form of vitamin B6, it is converted intoto pyridoxal phosphate which is a coenzyme for synthesis of amino acids, neurotransmitters, sphingolipids and aminolevulinic acid.

formula

C8H11NO3

has role

http://purl.obolibrary.org/obo/CHEBI_75772

http://purl.obolibrary.org/obo/CHEBI_77746

http://purl.obolibrary.org/obo/CHEBI_75771

http://purl.obolibrary.org/obo/CHEBI_76971

http://purl.obolibrary.org/obo/CHEBI_23357

has_alternative_id

CHEBI:26429

CHEBI:14981

CHEBI:8671

has_exact_synonym

4,5-bis(hydroxymethyl)-2-methylpyridin-3-ol

pyridoxine

has_obo_namespace

chebi_ontology

has_related_synonym

2-methyl-4,5-bis(hydroxymethyl)-3-hydroxypyridine

5-hydroxy-6-methyl-3,4-pyridinedimethanol

2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine

3-hydroxy-4,5-dimethylol-alpha-picoline

piridossina

2-methyl-3-hydroxy-4,5-di(hydroxymethyl)pyridine

2-methyl-4,5-dimethylol-pyridin-3-ol

2-Methyl-3-hydroxy-4,5-dihydroxymethyl-pyridin

pyridoxinum

2-methyl-3-hydroxy-4,5-dihydroxymethylpyridine

3-hydroxy-4,5-bis(hydroxymethyl)-2-methylpyridine

4,5-bis(hydroxymethyl)-2-methyl-pyridin-3-ol

pyridoxolum

3-hydroxy-2-picoline-4,5-dimethanol

Pyridoxol

pyridoxina

pyridoxine

vitamin B6

id

CHEBI:16709

in_subset

http://purl.obolibrary.org/obo/chebi#3_STAR

inchi

InChI=1S/C8H11NO3/c1-5-8(12)7(4-11)6(3-10)2-9-5/h2,10-12H,3-4H2,1H3

inchikey

LXNHXLLTXMVWPM-UHFFFAOYSA-N

label

pyridoxine

mass

169.180

monoisotopicmass

169.07389

notation

CHEBI:16709

prefLabel

pyridoxine

smiles

CC1=C(O)C(CO)=C(CO)C=N1

subClassOf

http://purl.obolibrary.org/obo/CHEBI_27306

http://purl.obolibrary.org/obo/CHEBI_38182

http://purl.obolibrary.org/obo/CHEBI_25340

http://purl.obolibrary.org/obo/CHEBI_38196

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/CHEBI_16709 CDNO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 FOODON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 FOODON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 PDRO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 BERO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 BIOMODELS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 DRON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 CHEBI SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 UPHENO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 ONSTR SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 HINO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 MAXO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 ZP SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16709 CDNO LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 FOODON LOOM
http://purl.bioontology.org/ontology/CSP/3147-5673 CRISP LOOM
http://www.phoc.org.cn/pmo/class/PMO_00018349 PMAPP-PMO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D03.383.725.676.925.875 RH-MESH LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0034272 OCHV LOOM
http://purl.bioontology.org/ontology/LNC/LP15842-5 LOINC LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 FOODON LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 PDRO LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 BERO LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 BIOMODELS LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 DRON LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 CHEBI LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 UPHENO LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 NIFSTD LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 ONSTR LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 HINO LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 MAXO LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 GO-PLUS LOOM
http://purl.obolibrary.org/obo/CHEBI_16709 ZP LOOM
http://purl.bioontology.org/ontology/LNC/MTHU012245 LOINC LOOM
http://purl.obolibrary.org/obo/UPa_UPC00314 UPA LOOM
http://purl.jp/bio/10/gmo/GMO_001632 GMO LOOM
http://purl.bioontology.org/ontology/MESH/D011736 MESH LOOM
http://purl.obolibrary.org/obo/OMIT_0012673 OMIT LOOM
https://go.drugbank.com/drugs/DB00165 MDM LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#10456 OCHV LOOM
http://purl.bioontology.org/ontology/VANDF/4021899 VANDF LOOM
http://purl.bioontology.org/ontology/NDFRT/N0000148007 NDFRT LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C62619 NCIT LOOM
http://purl.bioontology.org/ontology/VANDF/4019922 VANDF LOOM
http://purl.obolibrary.org/obo/NCIT_C62619 BERO LOOM
http://purl.bioontology.org/ontology/RXNORM/684879 RXNORM LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/430469009 SNOMEDCT LOOM
http://purl.obolibrary.org/obo/dinto_DB00165 DINTO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D011736 RH-MESH LOOM
http://purl.obolibrary.org/obo/MESH_D011736 BERO LOOM
http://www.drugbank.ca/drugs/DB00165 FTC LOOM
http://www.co-ode.org/ontologies/galen#Pyridoxine GALEN LOOM
http://purl.bioontology.org/ontology/LNC/LP32568-5 LOINC LOOM
http://localhost/plosthes.2017-1#7748 PLOSTHES LOOM
https://www.fns-cloud.eu/foodComponents/FNS_H_0000003414 FNS-H LOOM