Preferred Name

Scaffolding

Synonyms

Scaffold construction

Scaffold generation

Definitions

Scaffold may be positioned along a chromosome physical map to create a "golden path". Link together a non-contiguous series of genomic sequences into a scaffold, consisting of sequences separated by gaps of known length. The sequences that are linked are typically typically contigs; contiguous sequences corresponding to read overlaps.

ID

http://edamontology.org/operation_3216

comment

Scaffold may be positioned along a chromosome physical map to create a "golden path".

Created in

1.1

hasDefinition

Link together a non-contiguous series of genomic sequences into a scaffold, consisting of sequences separated by gaps of known length. The sequences that are linked are typically typically contigs; contiguous sequences corresponding to read overlaps.

hasExactSynonym

Scaffold construction

Scaffold generation

inSubset

http://purl.obolibrary.org/obo/edam#edam

http://purl.obolibrary.org/obo/edam#operations

label

Scaffolding

prefixIRI

operation_3216

prefLabel

Scaffolding

subClassOf

http://edamontology.org/operation_0310

http://edamontology.org/operation_3429

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http://id.loc.gov/authorities/subjects/sh85117898 FAST (Faceted Application of Subject Terminology) Topical Facet LOOM
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http://edamontology.org/operation_3216 Software Ontology LOOM
http://edamontology.org/operation_3216 Software Ontology SAME_URI
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Scaffolding Psychology Ontology LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Scaffolding Educational Cluster LOOM