Preferred Name |
Protein feature detection |
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Synonyms |
Protein feature prediction Protein feature recognition Protein site detection Sequence profile database search Protein site prediction Sequence feature detection (protein) Protein secondary database search Protein site recognition |
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Definitions |
Predict, recognise and identify positional features in proteins from analysing protein sequences or structures. Features includes functional sites or regions, secondary structure, structural domains and so on. Methods might use fingerprints, motifs, profiles, hidden Markov models, sequence alignment etc to provide a mapping of a query protein sequence to a discriminatory element. This includes methods that search a secondary protein database (Prosite, Blocks, ProDom, Prints, Pfam etc.) to assign a protein sequence(s) to a known protein family or group. |
|
ID |
http://edamontology.org/operation_3092 |
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comment |
Features includes functional sites or regions, secondary structure, structural domains and so on. Methods might use fingerprints, motifs, profiles, hidden Markov models, sequence alignment etc to provide a mapping of a query protein sequence to a discriminatory element. This includes methods that search a secondary protein database (Prosite, Blocks, ProDom, Prints, Pfam etc.) to assign a protein sequence(s) to a known protein family or group. |
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Created in |
beta13 |
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hasDefinition |
Predict, recognise and identify positional features in proteins from analysing protein sequences or structures. |
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hasExactSynonym |
Protein feature prediction Protein feature recognition |
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hasNarrowSynonym |
Protein site detection Sequence profile database search Protein site prediction Sequence feature detection (protein) Protein secondary database search Protein site recognition |
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inSubset | ||
label |
Protein feature detection |
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prefixIRI |
operation_3092 |
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prefLabel |
Protein feature detection |
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subClassOf |
Delete | Mapping To | Ontology | Source |
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http://edamontology.org/operation_3092 | ITO | SAME_URI | |
http://edamontology.org/operation_3092 | ITO | LOOM |