Preferred Name

Sequence assembly

Synonyms

Sequence assembly editing

Metagenomic assembly

Definitions

Combine (align and merge) overlapping fragments of a DNA sequence to reconstruct the original sequence. For example, assemble overlapping reads from paired-end sequencers into contigs (a contiguous sequence corresponding to read overlaps). Or assemble contigs, for example ESTs and genomic DNA fragments, depending on the detected fragment overlaps.

ID

http://edamontology.org/operation_0310

comment

For example, assemble overlapping reads from paired-end sequencers into contigs (a contiguous sequence corresponding to read overlaps). Or assemble contigs, for example ESTs and genomic DNA fragments, depending on the detected fragment overlaps.

Created in

beta12orEarlier

hasDefinition

Combine (align and merge) overlapping fragments of a DNA sequence to reconstruct the original sequence.

hasNarrowSynonym

Sequence assembly editing

Metagenomic assembly

inSubset

http://edamontology.org/bio

http://edamontology.org/operations

label

Sequence assembly

prefixIRI

operation_0310

prefLabel

Sequence assembly

seeAlso

https://en.wikipedia.org/wiki/Sequence_assembly

subClassOf

http://edamontology.org/operation_2478

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Delete Mapping To Ontology Source
http://edamontology.org/operation_0310 NGSONTO SAME_URI
http://edamontology.org/operation_0310 ITO SAME_URI
http://purl.obolibrary.org/obo/SO_0000353 SO LOOM
http://semanticscience.org/resource/sequence-assembly MATERIALSMINE LOOM
http://semanticscience.org/resource/SIO_000989 SIO LOOM
http://purl.obolibrary.org/obo/SO_0000353 HOIP LOOM
http://gbol.life/0.1/SequenceAssembly GBOL LOOM
http://purl.obolibrary.org/obo/SO_0000353 PDRO LOOM
http://purl.obolibrary.org/obo/SO_0000353 EUPATH LOOM
http://purl.obolibrary.org/obo/SO_0000353 OBI LOOM
http://purl.obolibrary.org/obo/SO_0000353 NGBO LOOM
http://purl.obolibrary.org/obo/SO_0000353 OBCS LOOM
http://purl.obolibrary.org/obo/SO_0000353 ONE LOOM
http://purl.obolibrary.org/obo/SO_0000353 EGO LOOM
http://purl.obolibrary.org/obo/SO_0000353 OBI_IEE LOOM
http://purl.obolibrary.org/obo/SO_0000353 NIFSTD LOOM
http://purl.obolibrary.org/obo/SO_0000353 GENEPIO LOOM
http://edamontology.org/topic_0196 BERO LOOM
http://edamontology.org/topic_0196 ITO LOOM
http://edamontology.org/topic_0196 BMT LOOM
http://semanticscience.org/resource/SIO_000989 HHEARP LOOM
http://semanticscience.org/resource/SIO_000989 CHEAR LOOM
http://semanticscience.org/resource/SIO_000989 BIOMO LOOM
http://semanticscience.org/resource/SIO_000989 SCO LOOM
http://semanticscience.org/resource/SIO_000989 HHEAR LOOM
http://semanticscience.org/resource/SIO_000989 HASCO LOOM
http://edamontology.org/data_0925 ITO LOOM
http://edamontology.org/operation_0310 NGSONTO LOOM
http://edamontology.org/operation_0310 ITO LOOM