Preferred Name |
BioXSD (XML) |
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Synonyms |
BioXSD XML format BioXSD/GTrack BioXSD data model BioXSD|GTrack BioXSD format BioXSD in XML BioXSD in XML format BioJSON BioXSD BioXSD XML BioXSD+XML BioYAML |
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Definitions |
BioXSD-schema-based XML format of sequence-based data and some other common data - sequence records, alignments, feature records, references to resources, and more - optimised for integrative bioinformatics, Web services, and object-oriented programming. 'BioXSD' belongs to the 'BioXSD|GTrack' ecosystem of generic formats. 'BioXSD in XML' is the XML format based on the common, unified 'BioXSD data model', a.k.a. 'BioXSD|BioJSON|BioYAML'. |
|
ID |
http://edamontology.org/format_2352 |
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comment |
'BioXSD' belongs to the 'BioXSD|GTrack' ecosystem of generic formats. 'BioXSD in XML' is the XML format based on the common, unified 'BioXSD data model', a.k.a. 'BioXSD|BioJSON|BioYAML'. |
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Citation |
http://doi.org/10.1186/1471-2105-12-494 |
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Created in |
beta12orEarlier |
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Documentation | ||
Example |
http://bioxsd.org/exampleFeatureRecords.html http://bioxsd.org/sequenceRecord.xml+json+yaml.xml |
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hasDbXref | ||
hasDefinition |
BioXSD-schema-based XML format of sequence-based data and some other common data - sequence records, alignments, feature records, references to resources, and more - optimised for integrative bioinformatics, Web services, and object-oriented programming. |
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hasExactSynonym |
BioXSD XML format BioXSD/GTrack BioXSD data model BioXSD|GTrack BioXSD format BioXSD in XML BioXSD in XML format BioJSON BioXSD BioXSD XML BioXSD+XML BioYAML |
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inSubset | ||
label |
BioXSD (XML) |
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Ontology used |
Any ontology allowed, none mandatory. Preferably with URIs but URIs are not mandatory. Non-ontology terms are also allowed as the last resort in case of a lack of suitable ontology. |
|
prefixIRI |
format_2352 |
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prefLabel |
BioXSD (XML) |
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Repository | ||
subClassOf |
http://edamontology.org/format_2555 http://edamontology.org/format_1919 http://edamontology.org/format_2571 |
Delete | Mapping To | Ontology | Source |
---|---|---|---|
http://edamontology.org/format_2352 | ITO | SAME_URI | |
http://edamontology.org/format_2352 | ITO | LOOM |