The Drug-Drug Interactions Ontology

Last uploaded: February 11, 2016
Preferred Name

berberine

Synonyms

9,10-dimethoxy-5,6-dihydro[1,3]dioxolo[4,5-g]isoquino[3,2-a]isoquinolin-7-ium

7,8,13,13a-tetradehydro-9,10-dimethoxy-2,3-[methylenebis(oxy)]berbinium

C20H18NO4

BERBERINE

Berberin

Berberine

9,10-dimethoxy-2,3-(methylenedioxy)-7,8,13,13a-tetradehydroberbinium

16,17-dimethoxy-5,7-dioxa-13$l^{5}-azapentacyclo[11.8.0.0^{2,10}.0^{4,8}.0^{15,20}]henicosa-1(21),2,4(8),9,13,15,17,19-octaen-13-ylium

Umbellatine

ID

http://purl.obolibrary.org/obo/CHEBI_16118

altId

CHEBI:22753

CHEBI:13893

CHEBI:41098

CHEBI:3066

CASRN

2086-83-1

DBname

berberine

Definition

A berberine alkaloid that has formula C20H18NO4.

has role

http://purl.obolibrary.org/obo/CHEBI_35610

http://purl.obolibrary.org/obo/CHEBI_35679

http://purl.obolibrary.org/obo/CHEBI_26619

http://purl.obolibrary.org/obo/CHEBI_22586

http://purl.obolibrary.org/obo/CHEBI_35526

http://purl.obolibrary.org/obo/CHEBI_23924

http://purl.obolibrary.org/obo/CHEBI_50509

InChI

InChI=1S/C20H18NO4/c1-22-17-4-3-12-7-16-14-9-19-18(24-11-25-19)8-13(14)5-6-21(16)10-15(12)20(17)23-2/h3-4,7-10H,5-6,11H2,1-2H3/q+1

InChIKey

InChIKey=YBHILYKTIRIUTE-UHFFFAOYSA-N

label

berberine

prefixIRI

obo2:CHEBI_16118

prefLabel

berberine

related with

http://purl.obolibrary.org/obo/dinto_3004

SMILES

COc1ccc2cc3-c4cc5OCOc5cc4CC[n+]3cc2c1OC

COC1=CC=C2C=C3C4=CC5=C(OCO5)C=C4CC[N+]3=CC2=C1OC

Synonym

9,10-dimethoxy-5,6-dihydro[1,3]dioxolo[4,5-g]isoquino[3,2-a]isoquinolin-7-ium

7,8,13,13a-tetradehydro-9,10-dimethoxy-2,3-[methylenebis(oxy)]berbinium

C20H18NO4

BERBERINE

Berberin

Berberine

9,10-dimethoxy-2,3-(methylenedioxy)-7,8,13,13a-tetradehydroberbinium

16,17-dimethoxy-5,7-dioxa-13$l^{5}-azapentacyclo[11.8.0.0^{2,10}.0^{4,8}.0^{15,20}]henicosa-1(21),2,4(8),9,13,15,17,19-octaen-13-ylium

Umbellatine

xref

CiteXplore:15531889

ChEBI:16118

PDBeChem:BER

HMDB:HMDB03409

CASRN:3570374

PDB:BER

PubChem Compound:2353

CiteXplore:23231038

CiteXplore:8730735

DrugBank:DB04115

PharmGKB:PA165860812

CiteXplore:18537696

ChEMBL:166831

CiteXplore:19704371

CiteXplore:21500372

PubChem Substance:46506051

NIST Chemistry WebBook:2086-83-1

CASRN:2086-83-1

KEGG COMPOUND:C00757

CiteXplore:19014947

CiteXplore:19652370

CiteXplore:17089049

subClassOf

http://purl.obolibrary.org/obo/dinto_000055

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/CHEBI_16118 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16118 CHEBI SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16118 PDRO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16118 BERO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16118 BIOMODELS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16118 DRON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16118 GO-PLUS LOOM
http://purl.obolibrary.org/obo/CHEBI_16118 CHEBI LOOM
http://www.phoc.org.cn/pmo/class/PMO_00017995 PMAPP-PMO LOOM
http://purl.obolibrary.org/obo/OMIT_0002964 OMIT LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D001599 RH-MESH LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0005117 OCHV LOOM
http://purl.bioontology.org/ontology/NDFRT/N0000181309 NDFRT LOOM
https://go.drugbank.com/drugs/DB04115 MDM LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C83551 NCIT LOOM
http://purl.bioontology.org/ontology/SNMI/C-30322 SNMI LOOM
http://purl.bioontology.org/ontology/VANDF/4029969 VANDF LOOM
http://id.nlm.nih.gov/mesh/D001599 MDM LOOM
http://purl.obolibrary.org/obo/MESH_D001599 BERO LOOM
http://purl.bioontology.org/ontology/RXNORM/1437 RXNORM LOOM
http://purl.obolibrary.org/obo/ARO_3003933 ARO LOOM
http://purl.obolibrary.org/obo/CHEBI_16118 PDRO LOOM
http://purl.obolibrary.org/obo/CHEBI_16118 BERO LOOM
http://purl.obolibrary.org/obo/CHEBI_16118 BIOMODELS LOOM
http://purl.obolibrary.org/obo/CHEBI_16118 DRON LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#1807 OCHV LOOM
http://purl.obolibrary.org/obo/NCIT_C83551 BERO LOOM
http://purl.jp/bio/4/id/200906035101822111 IOBC LOOM
http://stirdf.jst.go.jp/id/200907018024114194 IOBC LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D03.549.168.100 RH-MESH LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/200001 SNOMEDCT LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D03.132.098.057.100 RH-MESH LOOM
http://purl.bioontology.org/ontology/MESH/D001599 MESH LOOM
http://purl.bioontology.org/ontology/NDDF/002417 NDDF LOOM