Preferred Name

berberine

Synonyms

9,10-dimethoxy-5,6-dihydro[1,3]dioxolo[4,5-g]isoquino[3,2-a]isoquinolin-7-ium

BERBERINE

Berberine

berberine

7,8,13,13a-tetradehydro-9,10-dimethoxy-2,3-[methylenebis(oxy)]berbinium

5,6-dihydro-9,10-dimethoxy-1,3-benzodioxolo[5,6-a]benzo[g]quinolizinium

Berberin

9,10-dimethoxy-2,3-(methylenedioxy)-7,8,13,13a-tetradehydroberbinium

Umbellatine

ID

http://purl.obolibrary.org/obo/CHEBI_16118

charge

+1

database_cross_reference

PMID:15768991

PMID:18537696

PMID:12428952

PMID:16448624

PMID:17531424

PDBeChem:BER

PMID:8730735

PMID:12232209

PMID:26167392

PMID:15739507

PMID:23231038

Pesticides:berberine

Beilstein:3570374

DrugBank:DB04115

PMID:19704371

PMID:21420512

PMID:19336898

PMID:20847417

PMID:20471843

PMID:21500372

PMID:17089049

PMID:15040083

PMID:19652370

PMID:12433089

PMID:21661731

FooDB:FDB023165

PMID:15531889

PMID:12468268

MetaCyc:BERBERINE

KEGG:C00757

LINCS:LSM-6553

PMID:11860742

PMID:17295371

PMID:16379555

PMID:19640223

KNApSAcK:C00001819

Chemspider:2263

PMID:19014947

Wikipedia:Berberine

HMDB:HMDB0003409

PMID:16505103

CAS:2086-83-1

PMID:21401114

formula

C20H18NO4

has role

http://purl.obolibrary.org/obo/CHEBI_50469

http://purl.obolibrary.org/obo/CHEBI_77113

http://purl.obolibrary.org/obo/CHEBI_35610

http://purl.obolibrary.org/obo/CHEBI_35608

http://purl.obolibrary.org/obo/CHEBI_77108

http://purl.obolibrary.org/obo/CHEBI_68612

http://purl.obolibrary.org/obo/CHEBI_35679

http://purl.obolibrary.org/obo/CHEBI_77111

http://purl.obolibrary.org/obo/CHEBI_22586

http://purl.obolibrary.org/obo/CHEBI_35526

http://purl.obolibrary.org/obo/CHEBI_37733

http://purl.obolibrary.org/obo/CHEBI_38462

http://purl.obolibrary.org/obo/CHEBI_176497

http://purl.obolibrary.org/obo/CHEBI_72854

http://purl.obolibrary.org/obo/CHEBI_76779

http://purl.obolibrary.org/obo/CHEBI_77115

http://purl.obolibrary.org/obo/CHEBI_25212

http://purl.obolibrary.org/obo/CHEBI_48550

http://purl.obolibrary.org/obo/CHEBI_50509

http://purl.obolibrary.org/obo/CHEBI_77110

has_alternative_id

CHEBI:22753

CHEBI:13893

CHEBI:41098

CHEBI:3066

has_exact_synonym

9,10-dimethoxy-5,6-dihydro[1,3]dioxolo[4,5-g]isoquino[3,2-a]isoquinolin-7-ium

BERBERINE

Berberine

berberine

has_obo_namespace

chebi_ontology

has_related_synonym

7,8,13,13a-tetradehydro-9,10-dimethoxy-2,3-[methylenebis(oxy)]berbinium

5,6-dihydro-9,10-dimethoxy-1,3-benzodioxolo[5,6-a]benzo[g]quinolizinium

Berberin

9,10-dimethoxy-2,3-(methylenedioxy)-7,8,13,13a-tetradehydroberbinium

Umbellatine

id

CHEBI:16118

in_subset

http://purl.obolibrary.org/obo/chebi#3_STAR

inchi

InChI=1S/C20H18NO4/c1-22-17-4-3-12-7-16-14-9-19-18(24-11-25-19)8-13(14)5-6-21(16)10-15(12)20(17)23-2/h3-4,7-10H,5-6,11H2,1-2H3/q+1

inchikey

YBHILYKTIRIUTE-UHFFFAOYSA-N

label

berberine

mass

336.36126

monoisotopicmass

336.12303

notation

CHEBI:16118

prefLabel

berberine

smiles

COc1ccc2cc3-c4cc5OCOc5cc4CC[n+]3cc2c1OC

treeView

http://purl.obolibrary.org/obo/CHEBI_38164

http://purl.obolibrary.org/obo/CHEBI_86494

http://purl.obolibrary.org/obo/CHEBI_22754

http://purl.obolibrary.org/obo/CHEBI_86322

subClassOf

http://purl.obolibrary.org/obo/CHEBI_38164

http://purl.obolibrary.org/obo/CHEBI_86494

http://purl.obolibrary.org/obo/CHEBI_22754

http://purl.obolibrary.org/obo/CHEBI_86322

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/CHEBI_16118 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16118 PDRO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16118 DINTO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16118 BERO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16118 BIOMODELS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16118 DRON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16118 GO-PLUS LOOM
http://www.phoc.org.cn/pmo/class/PMO_00017995 PMAPP-PMO LOOM
http://purl.obolibrary.org/obo/OMIT_0002964 OMIT LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D001599 RH-MESH LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0005117 OCHV LOOM
http://purl.bioontology.org/ontology/NDFRT/N0000181309 NDFRT LOOM
https://go.drugbank.com/drugs/DB04115 MDM LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C83551 NCIT LOOM
http://purl.bioontology.org/ontology/SNMI/C-30322 SNMI LOOM
http://purl.bioontology.org/ontology/VANDF/4029969 VANDF LOOM
http://id.nlm.nih.gov/mesh/D001599 MDM LOOM
http://purl.obolibrary.org/obo/MESH_D001599 BERO LOOM
http://purl.bioontology.org/ontology/RXNORM/1437 RXNORM LOOM
http://purl.obolibrary.org/obo/ARO_3003933 ARO LOOM
http://purl.obolibrary.org/obo/CHEBI_16118 PDRO LOOM
http://purl.obolibrary.org/obo/CHEBI_16118 DINTO LOOM
http://purl.obolibrary.org/obo/CHEBI_16118 BERO LOOM
http://purl.obolibrary.org/obo/CHEBI_16118 BIOMODELS LOOM
http://purl.obolibrary.org/obo/CHEBI_16118 DRON LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#1807 OCHV LOOM
http://purl.obolibrary.org/obo/NCIT_C83551 BERO LOOM
http://purl.jp/bio/4/id/200906035101822111 IOBC LOOM
http://stirdf.jst.go.jp/id/200907018024114194 IOBC LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D03.549.168.100 RH-MESH LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/200001 SNOMEDCT LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D03.132.098.057.100 RH-MESH LOOM
http://purl.bioontology.org/ontology/MESH/D001599 MESH LOOM
http://purl.bioontology.org/ontology/NDDF/002417 NDDF LOOM