Cell Culture Ontology

Last uploaded: July 23, 2014
Preferred Name

Synonyms

acropodial unit

digit (phalangeal portion) plus soft tissue

limb digit

Definitions

A subdivision of the autopod that has as part a series of phalanges together with associated vasculature, musculature, integument and nerves. It is continuous with the metapodial subdivision of the autopod, but does not include the metapodials. In species such as humans, fully formed digits are distinct, whereas in other species the digits may be connected by interdigital webbing, or may be completely unseparated (for example, in cetaceans).

ID

http://purl.obolibrary.org/obo/UBERON_0002544

contributor

https://github.com/cmungall

https://github.com/alex-dececchi

https://github.com/wdahdul

https://github.com/balhoff

curator note

this class represents the entire organism subdivision encompassing soft tissue as well as the underlying skeletal framework. The class represents the phalangeal part only - historically the term 'digit' has also been used to represent the unit consisting of a series of phalanges together with a metapodial bone. We may in future relabel this class to avoid confusion with this concept, but the class will continue to represent the phalangeal portion

database_cross_reference

UMLS:C0582802

MIAA:0000285

EFO:0000881

Wikipedia:Digit_(anatomy)

SCTID:361367007

XAO:0003032

VHOG:0000944

AAO:0011126

galen:Digit

EMAPA:32725

NCIT:C40186

MAT:0000285

FMA:85518

MA:0000690

definition

A subdivision of the autopod that has as part a series of phalanges together with associated vasculature, musculature, integument and nerves. It is continuous with the metapodial subdivision of the autopod, but does not include the metapodials. In species such as humans, fully formed digits are distinct, whereas in other species the digits may be connected by interdigital webbing, or may be completely unseparated (for example, in cetaceans).

has_exact_synonym

acropodial unit

digit (phalangeal portion) plus soft tissue

limb digit

has_obo_namespace

uberon

has_relational_adjective

digital

homology_notes

Our reinterpretation of the distal fin endoskeleton of Panderichthys removes the final piece of evidence supporting the formerly popular hypothesis that tetrapod digits are wholly new structures without homologues in sarcopterygian fish fins. This hypothesis, which was based partly on the complete absence of plausible digit homologues in Panderichthys (then the closest known relative of tetrapods), has already been called into question by the discovery of digit-like radials in Tiktaalik and the fact that Hox gene expression patterns closely resembling those associated with digit formation in tetrapods occur in the distal fin skeletons of paddlefish and Australian lungfish. Our new data show that Panderichthys is not an anomaly: like Tiktaalik and other fish members of the Tetrapodomorpha, it has distal radials that can be interpreted as digit homologues.[well established][VHOG]

id

UBERON:0002544

in_subset

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

digit

notation

UBERON:0002544

part_of

http://purl.obolibrary.org/obo/UBERON_0000468

RO_0002171

http://purl.obolibrary.org/obo/UBERON_0009877

treeView

http://purl.obolibrary.org/obo/UBERON_0000468

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000061

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