Breast tissue cell lines Summary

Metrics

Number of classes:	385
Number of individuals:	0
Number of properties:	27
Maximum depth:	8
Maximum number of siblings:	153
Average number of siblings:	24
Classes with a single subclass:	35 Classes with a single subclass MCBCC_0000001:FluidsAndSecretions MCBCC_0000007:BacterialToxin MCBCC_0000010:AdrenalCortexHormone MCBCC_0000012:PancreaticHormone MCBCC_0000013:Proinsulin MCBCC_0000071:NormalCellLine MCBCC_0000254:PathologicalMouseCellLine MCBCC_0000257:HormoneAntagonists MCBCC_0000261:Lipid MCBCC_0000262:FattyAcid MCBCC_0000264:OrganicChemicals MCBCC_0000265:Hydrocarbons MCBCC_0000267:Carotenoids MCBCC_0000268:Retinoids MCBCC_0000269:VitaminA MCBCC_0000271:Diterpenes MCBCC_0000272:Phorbols MCBCC_0000273:PhorbolEsters MCBCC_0000275:ReceptorAntagonists MCBCC_0000288:ChromosomalMutation MCBCC_0000343:Neoplasms MCBCC_0000346:DuctalCarcinomaInSitu fma3:Cardinal_body_part fma3:ExocrineGland fma3:ImmuneSystem fma3:LymphaticSystem fma3:LymphoidTissue fma3:NervousSystem fma3:RespiratorySystem fma3:ThoracicWall fma3:Thorax fma3:neuraxis fma3:portion_of_tissue http://purl.org/obo/owl/DOID#BreastDiseases http://purl.org/obo/owl/DOID#SquamousCellCarcinomaOfBreast
Classes with more than 25 subclasses:	3 Classes with more than 25 subclasses MCBCC_0000072:NormalHumanCellLine (26) MCBCC_0000100:PathologicalHumanCellLine (26) MCBCC_0000015:Protein (26)
Classes with no definition:	385

Details

Ontology Id	1438
Acronym	MCBCC
Visibility	Public
BioPortal PURL	http://purl.bioontology.org/ontology/MCBCC
Status
Format	OWL
Categories	Cell
Groups
Contact	Dr. Arathi Raghunath, arathi@molecularconnections.com
Home Page	www.molecularconnections.com
Publications Page
Documentation Page
Description	Contains a comprehensive list of cell lines derived from breast tissue, both normal and pathological. The ontology in built in OWL with cross relation to classes- genetic variation, pathological condition, genes, chemicals and drugs. The relations built enable semantic query across different classes

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Versions

Version	Release Date	Upload Date	Downloads
2.0	07/30/2010	07/29/2010	Ontology / Diff
1.0	03/02/2010	03/01/2010	Ontology

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Project	Description	People	Institution
OntoCAT	High level abstraction API (Java/REST/R) for interacting with o... High level abstraction API (Java/REST/R) for interacting with ontology resources including local ontology files in standard OWL and OBO formats (via OWL API) and public ontology repositories: EBI Ontology Lookup Service (OLS) and NCBO BioPortal.	Tomasz Adamus... Tomasz Adamusiak, Helen Parkinson, Natalja Kurbatova, Misha Kapushesky, Morris Swertz	EMBL-EBI, University of Groningen
web service	It is a healthcare analysis system It is a healthcare analysis system		Health
OntoMaton	OntoMaton is a google spreadsheet application allowing for onto... OntoMaton is a google spreadsheet application allowing for ontology search and tagging directly within google spreadsheets. More information can be found here: https://github.com/ISA-tools/OntoMaton	ISA team ISA team	Oxford University

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