Preferred Name (rdfs:label)

organism
Definitions (definition)

A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.
ID

obo:OBI_0100026
Full Id

http://purl.obolibrary.org/obo/OBI_0100026
definition

A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.
definition source

WEB: http://en.wikipedia.org/wiki/Organism
editor note

10/21/09: This is a placeholder term, that should ideally be imported from the NCBI taxonomy, but the high level hierarchy there does not suit our needs (includes plasmids and 'other organisms')

13-02-2009: OBI doesn't take position as to when an organism starts or ends being an organism - e.g. sperm, foetus. This issue is outside the scope of OBI.
editor preferred term

organism
example of usage

fungus

animal

virus

plant
has curation status

organizational term
label

organism
term editor

GROUP: OBI Biomaterial Branch
subClassOf

material entity
Create New Mapping

Mapping To Ontology Source Comment Relationship Added By Added On Notes
http://purl.obolibrary.org/obo/OBI_0100026 Bioinformatics Web Service Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://purl.org/net/OCRe/OCRe.owl#OCRE400064 Ontology of Clinical Research (OCRe) NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Organisms NCI Thesaurus NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://www.loria.fr/~coulet/ontology/snpontology/version1.6/snpontology_full.owl#organism SNP-Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://www.co-ode.org/ontologies/basic-bio/top-bio.owl#Organism Basic Vertebrate Anatomy NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://www.icn.ch/icnp#Organism International Classification for Nursing Practice NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://ontology.neuinfo.org/NIF/NIF-NCBITaxonomy-Slim.owl#nlx_organ_110506 Neuroscience Information Framework Standard ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.org/stemnet/MHC#Organism MaHCO - An MHC Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://paige.ctegd.uga.edu/ParasiteLifecycle.owl#organism Parasite Experiment Ontology BioPortal UI skos:exactMatch knoesis 03/10/11 View Notes
http://ontology.neuinfo.org/NIF/Backend/BIRNLex-OBO-UBO.owl#birnlex_2 NIF-Subcellular NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Neuroscience Information Framework Standard ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://sweet.jpl.nasa.gov/2.3/matrBiomass.owl#Organism Semantic Web for Earth and Environment Technology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://www.bootstrep.eu/ontology/GRO#Organism Gene Regulation Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://www.mygrid.org.uk/ontology/JERMOntology#organism SysMO-JERM NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://www.ifomis.org/acgt/1.0#Organism Cancer Research and Management ACGT Master Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Organisms Synapse Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Human Interaction Network Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://www.bioassayontology.org/bao#BAO_0000551 BioAssay Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://www.semanticweb.org/ontologies/2010/5/22/Ontology1277229984000.owl#HPI:0000001 Host Pathogen Interactions Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.bioontology.org/ontology/SNOMEDCT/257495001 SNOMED Clinical Terms NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://www.owl-ontologies.com/Ontology1358660052.owl#Organism Pediatric Terminology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://www.semanticweb.org/ontologies/2010/2/MiRNA-Ontology.owl#Organism Ontology for MicroRNA Target Prediction NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Ontology for Parasite LifeCycle NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://semanticscience.org/resource/SIO_010000 SemanticScience Integrated Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://bioontology.org/projects/ontologies/birnlex#birnlex_376 BIRNLex NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Infectious Disease Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Ontology of Medically Related Social Entities NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://purl.obolibrary.org/obo/UBERON_0000468 Uber anatomy ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Ontology for Drug Discovery Investigations NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://www.bridgmodel.org/owl#BiologicEntity The Biomedical Research Integrated Domain Group (BRIDG) model NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/ODGI.owl#Organism Ontology for disease genetic investigation NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://www.w3.org/2001/sw/hcls/ns/transmed/TMO_0144 Translational Medicine Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_2 Neuroscience Information Framework Standard ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://chem.deri.ie/granatum#Organism Cancer Chemoprevention Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Interaction Network Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://www.bootstrep.eu/ontology/GRO#Organism Synapse Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
https://code.ecoinformatics.org/code/semtools/trunk/dev/oboe/oboe-sbc.owl#Organism Santa Barbara Coastal Observation Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Ontology of Adverse Events NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 COG Analysis Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://purl.obolibrary.org/obo/EKB_0000011 Loggerhead nesting NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 microRNA Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://bioontology.org/projects/ontologies/birnlex#birnlex_2 BIRNLex NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://jcggdb.jp/rdf/rcmg/rdfschema/20130311/glycoprot.owl#organism glycoprotein ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://ontology.neuinfo.org/NIF/Backend/BIRNLex-OBO-UBO.owl#birnlex_2 NIF Dysfunction NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Ontology for Genetic Susceptibility Factor NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://www.loria.fr/~coulet/ontology/snpontology/version1.5/snpontology_full.owl#organism Suggested Ontology for Pharmacogenomics NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/IDOMAL_0000640 Dengue Fever Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.bioontology.org/ontology/SNOMEDCT/410607006 SNOMED Clinical Terms NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_376 Neuroscience Information Framework Standard ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/MAO_0000041 Multiple alignment NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/UBERON_0000468 Cell type NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/WBbt_0007833 C. elegans gross anatomy NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.bioontology.org/ontology/CSP/4000-0232 CRISP Thesaurus, 2006 NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Vaccine Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://purl.bioontology.org/ontology/RCD/X79o9 Read Codes, Clinical Terms Version 3 (CTV3) NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://onto.eva.mpg.de/ontologies/gfo-bio.owl#Organism General Formal Ontology: Biology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://lsdis.cs.uga.edu/projects/glycomics/propreo#organism Proteomics data and process provenance NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://ontology.neuinfo.org/NIF/Backend/BIRNLex-OBO-UBO.owl#birnlex_2 NIF Cell NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 BioAssay Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Brucellosis Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://purl.org/cpr/organism Sleep Domain Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Influenza Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://purl.bioontology.org/ontology/SNOMEDCT/410653004 SNOMED Clinical Terms NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://ecoinformatics.org/oboe/oboe.1.0/oboe-biology.owl#Organism Santa Barbara Coastal Observation Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#Organism Microarray and Gene Expression Data Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://ontology.neuinfo.org/NIF/Backend/BIRNLex-OBO-UBO.owl#birnlex_2 Neuroscience Information Framework Standard ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Experimental Factor Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://purl.obolibrary.org/obo/FBbt_00000001 Drosophila gross anatomy NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 Cell Cycle Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 PRotein Ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes
http://purl.obolibrary.org/obo/IDOMAL_0000640 Malaria Ontology NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://www.co-ode.org/ontologies/galen#Organism Galen NCBO (lexical mapping) skos:closeMatch loom 04/02/13 View Notes
http://purl.obolibrary.org/obo/OBI_0100026 eagle-i research resource ontology NCBO (Identical URI) skos:exactMatch loom 04/03/13 View Notes

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