SNOMED Clinical Terms - Microorganism | NCBO BioPortal

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Preferred Name	Microorganism
Synonyms	Microorganism (organism)
ID	264395009
Full Id	http://purl.bioontology.org/ontology/SNOMEDCT/264395009
component_of	Bacterial culture, screening Ameba culture Microbial culture, tissue Streptococcus pyogenes culture Toxoplasma species culture Culture for single organism, screening by commercial kit Environmental culture for fungus Anaerobic microbial culture HIV culture Rotavirus culture Nocardia species culture Culture of cornea Herpes virus culture Enterovirus culture Salmonella species culture Trichomonas species culture Infectious bronchitis virus culture Microbial subculture Aerobic blood culture Viral culture Quantitative microbial culture, droplet method Genital Mycoplasma species, culture Enteric culture screening test Escherichia coli O157:H7 culture Chlamydia culture Quantitative microbial culture, filter paper method Bacterial culture, urine, with colony count Quantitative urine culture, 1:10 dilution Bacillus anthracis culture Campylobacter species culture Leptospira species culture Parainfluenza virus culture Actinomycetes species culture Stool culture Giardia species culture Culture, acid-fast bacilli, concentration and isolation Microbial culture, anaerobic, initial isolation Bordetella pertussis culture Calymmatobacterium granulomatis culture Blood culture Mycoplasma hominis culture Rubella virus culture Microbial culture Mycoplasma OR ureaplasma species culture Food culture Mycology culture Culture for multiple organisms, screening by commercial kit Fungal culture, with definitive identification Herpes simplex virus culture Shigella species culture Anaerobic blood culture Mycobacterium paratuberculosis culture Bacillus cereus culture Respiratory Mycoplasma species, culture Bacterial culture, urine, with organism identification Varicella virus culture Mycoplasma culture Arbovirus culture Culture of semen Chlamydia pneumoniae culture Chlamydia trachomatis culture Quantitative urine culture, 1:100 dilution Microbial culture, routine Microbial culture, room temperature Quantitative microbial culture, pad culture method Escherichia coli enterotoxic culture Blood culture for MAC Leishmania species culture Bifidobacterium species culture Brucella species culture Haemophilus species culture Neisseria meningitidis culture Bacterial culture, urine, by commercial kit Enterococcus vancomycin resistant culture Culture, screening by commercial kit, with colony estimation from density chart Vibrio species culture Organism specific culture Helicobacter pylori culture Ureaplasma urealyticum culture Source specific culture Quantitative microbial culture and measurement Quantitative microbial culture, pour plate method Fungal culture, blood, with isolation Serpulina hyodysenteriae culture Neisseria gonorrhoeae culture Culture of environmental surface Culture - general Acanthamoeba species culture Haemophilus ducreyi culture Blood culture for bacteria, including anaerobic screen Mumps virus culture Quantitative urine culture, 1:1000 dilution Flavivirus culture Aspergillus species culture Air culture for fungus Microbial culture, aerobic, initial isolation Microbial culture with overlay technique, initial isolation Culture for parasites Naegleria species culture Streptococcus agalactiae culture Escherichia coli shiga-like culture Sputum culture for mycobacterium Chlamydia psittaci culture Corynebacterium diphtheriae culture Candida species culture Herpes simplex virus 1 culture Mycobacteria culture Influenza virus culture Escherichia coli enteroinvasive culture Microbial culture, aerobic, screen Microbial culture, slide Culture of biological indicator Culture, screening by commercial kit, with colony count Microbial culture of sputum Culture of semen for Brucella Rickettsia species culture Stool culture for bacteria Fungal culture, skin, with isolation Cytomegalovirus culture, conventional and rapid Yeast culture Urine culture Bordetella species culture Yersinia species culture Quantitative microbial culture, surface streak method Staphylococcus species culture Culture of medical device Microbial culture in partial CO>2 Thermophilic Actinomycetes culture Beta-hemolytic Streptococcus culture Fungal blood culture Cerebrospinal fluid culture Throat culture Culture of specimen by commercial kit Bacterial culture Rabies virus culture Microbial culture, complex Respiratory syncytial virus culture Aerobic microbial culture Bone marrow culture CLO test for helicobacter pylori Escherichia coli verotoxic culture Clostridium difficile culture Borrelia hermsii culture Schistosoma species culture Direct burn culture Cytomegalovirus culture Retrovirus culture Mycobacteria culture, with definitive identification Listeria species culture Equine arteritis virus culture Respiratory microbial culture Herpes simplex virus isolation Culture of blood bank product Trypanosoma species culture Culture of dialysis fluid Nose/throat culture for bacteria Microbial culture of cerebrospinal fluid Borrelia species culture Legionella species culture Gardnerella vaginalis culture Quantitative microbial culture, cup method Borrelia burgdorferi culture Tritrichomonas foetus culture Quantitative urine culture Microbial culture, body fluid Adenovirus species culture Culture of conjunctiva Microbial culture, anaerobic, screen Cystic fibrosis respiratory culture
CONCEPTSTATUS	0
CTV3ID	XC0Td
inverse_may_be_a	Microorganism or parasite
isa	Organism
ISPRIMITIVE	1
replaces	Non-bacterial microorganism Non-bacterial non-viral microorganism
Semantic_Type	Organism
SNOMEDID	L-00040
SYNONYM FN	Microorganism (organism)
TUI	T001
UMLS_CUI	C0445623

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Mapping To	Ontology	Source	Comment	Relationship	Added By	Added On	Notes
http://purl.bioontology.org/ontology/HL7/C0445623	Health Level Seven	NLM UMLS (CUI)	CUI: C0445623	skos:closeMatch	loom	04/02/13	View Notes
http://purl.bioontology.org/ontology/HL7/C0445623	Health Level Seven	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://purl.bioontology.org/ontology/RCD/XC0Td	Read Codes, Clinical Terms Version 3 (CTV3)	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Microorganism	NCI Thesaurus	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://purl.bioontology.org/ontology/LNC/MTHU019420	Logical Observation Identifier Names and Codes	NLM UMLS (CUI)	CUI: C0445623	skos:closeMatch	loom	04/02/13	View Notes
http://purl.bioontology.org/ontology/CSP/1928-6281	CRISP Thesaurus, 2006	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://purl.bioontology.org/ontology/LNC/MTHU019420	Logical Observation Identifier Names and Codes	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://purl.bioontology.org/ontology/LNC/LP14559-6	Logical Observation Identifier Names and Codes	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://www.bootstrep.eu/ontology/GRO#Microorganism	Gene Regulation Ontology	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://purl.bioontology.org/ontology/RCD/XC0Td	Read Codes, Clinical Terms Version 3 (CTV3)	NLM UMLS (CUI)	CUI: C0445623	skos:closeMatch	loom	04/02/13	View Notes
http://purl.bioontology.org/ontology/CSP/1928-6281	CRISP Thesaurus, 2006	NLM UMLS (CUI)	CUI: C0445623	skos:closeMatch	loom	04/02/13	View Notes
http://www.bootstrep.eu/ontology/GRO#Microorganism	Synapse Ontology	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#CDISC_SDTM_Microorganism_Terminology	NCI Thesaurus	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://purl.bioontology.org/ontology/LNC/LP14559-6	Logical Observation Identifier Names and Codes	NLM UMLS (CUI)	CUI: C0445623	skos:closeMatch	loom	04/02/13	View Notes
http://www.co-ode.org/ontologies/galen#MicroOrganism	Galen	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://www.icn.ch/icnp#Microorganism	International Classification for Nursing Practice	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://purl.org/biotop/biotop.owl#Microorganism	Neglected Tropical Disease Ontology (NTDO)	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://purl.org/biotop/biotop.owl#Microorganism	BioTop	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Microorganism	Synapse Ontology	NCBO (lexical mapping)		skos:closeMatch	loom	04/02/13	View Notes

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